Gene Cphamn1_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1516 
Symbol 
ID6375194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1637637 
End bp1639124 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content52% 
IMG OID642684009 
Productcobyric acid synthase 
Protein accessionYP_001959923 
Protein GI189500453 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0172063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATC TCGCGGTTTT CGGGACAGCG TCGGATGTTG GGAAAAGCGT CGTAGCTACG 
GCCCTATGCC GTATTTTCAG CAATGCCGGG CTCGATGTTG CGCCTTTCAA GGCGCAGAAC
ATGTCCAATA ATTCCGGCGT TACACCGGAT GGTCTTGAAA TGGGACGAGC GCAGATTGTG
CAGGCCGAAG CCGCCAGAGT CGTCCCGACG GCGGATATGA ACCCGGTACT GCTTAAACCA
AATACCGATA CCGGTGCGCA GGTGGTTTTA CAGGGCAAGG CTGTCGCCAA CCGCTCTGCC
CGTGATTATT TCGGCAACAC TGAAGTCTGG GCAGAGGCTG CGTTTGAAAG TCTTGAGCGC
CTGACAGGCA GGCATGACCT TGTCGTTATC GAGGGCGCTG GTTCCTGTGC GGAGATGAAT
CTTTATGACC GGGATTTCGT GAATTTCAGG ACAGCAAAAG AAGCCGACGC GCCGGTCATT
CTTGTGGCCG ATATTGACAG GGGCGGGGTA TTCGCGCAGG TTGCAGGGAC GCTTTCTGTC
ATTCCTCCCG AAGACAGGGC GCGGGTAAAA GGTGTTATTA TCAACCGCTT CCGCGGGGAT
TCGGTCCTTT TCGATGATGG AATCCGTATT CTCGAGGAAC TGTCCGGAGT GCCGGTGCTT
GGTGTTATAC CATATTTCAG AGGGATCCAC ATCGAGGCTG AAGACGCAGT GCCGCTTCAG
GCGGTTGTCG ATCCTGCGGC ATCTCCTGAT CCCGGGAAGA TCAGTATAGC GATCGTGTAT
TTTCCTCATA TATCGAACTT TACTGATTTC GCTGTATTTG ACCTGCTCGA TGATGCAGAA
GTTCATTACC TGCATCACCC CAAAGATCTT GCTGACTATG ATGCGGTCAT TCTGCCTGGA
TCGAAAAATG TCAGGGGAGA TCTCGACTGG ATGATTTTTA TGGGCTGGAA AGAACGGCTC
GCTGAATACC GGAAGAGGGG AGGGATTATC GCGGGTATTT GCGGAGGCTA CCAGATGCTC
GGAATATCCG TTGCCGATCC ACATGGCCTT GAAGGAGAGC CCGGAGAAAC ATCGGGTCTC
GGTCTGCTTC CGGTGCATAC GCTCCTCAAG AAAGAAAAAC AGCTGTTCAA CGCTAAAGGC
TGTCTGTTCG ATGACACGAT ACCTGTCGAG GGTTATGAAA TCCATATGGG GGAAACCCGG
CTTACAGGCA AGGCGTCGCC CCTGCTGCAG TTGACGGCAA GAAACAACAG GCATTCCTCT
GATACTGACG GAGTCATAAG CCATGATGAA AAGGTTTTTG GTACCTACTT TCACGGCATT
TTTGACGGGA GTGCGTTCAG AGGCTGGTTT CTCGGCAAGC TGAGACCGGA CTCTGCTGTG
AACGATACCA TTACGGAGAA GGATACTGAA TACAACCGGC TCGCAGAGCA CTTTTTGAGT
CATCTCAATA TGGGAAAAGT GTATGAAATT ATAGGACGAG GGAAGTGA
 
Protein sequence
MRNLAVFGTA SDVGKSVVAT ALCRIFSNAG LDVAPFKAQN MSNNSGVTPD GLEMGRAQIV 
QAEAARVVPT ADMNPVLLKP NTDTGAQVVL QGKAVANRSA RDYFGNTEVW AEAAFESLER
LTGRHDLVVI EGAGSCAEMN LYDRDFVNFR TAKEADAPVI LVADIDRGGV FAQVAGTLSV
IPPEDRARVK GVIINRFRGD SVLFDDGIRI LEELSGVPVL GVIPYFRGIH IEAEDAVPLQ
AVVDPAASPD PGKISIAIVY FPHISNFTDF AVFDLLDDAE VHYLHHPKDL ADYDAVILPG
SKNVRGDLDW MIFMGWKERL AEYRKRGGII AGICGGYQML GISVADPHGL EGEPGETSGL
GLLPVHTLLK KEKQLFNAKG CLFDDTIPVE GYEIHMGETR LTGKASPLLQ LTARNNRHSS
DTDGVISHDE KVFGTYFHGI FDGSAFRGWF LGKLRPDSAV NDTITEKDTE YNRLAEHFLS
HLNMGKVYEI IGRGK