Gene Cphamn1_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1481 
Symbol 
ID6375159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1603759 
End bp1605243 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content52% 
IMG OID642683974 
Productpyridine nucleotide-disulphide oxidoreductase dimerisation region 
Protein accessionYP_001959888 
Protein GI189500418 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG ATTTTGATGT TATCGTTATC GGGGGCGGCG CGGCAGGGTT GACAGCAGCA 
GGAGTCTCAG CTTCACTCGG AGCAAAAACC GCCATGATAG AGAAAAAAAA ACTTGGCGGG
GACTGCACCT GGTATGGCTG CATCCCGAGC AAAGCACTCC TGAAATCCGC AAAAGTGGCT
CAAACCGTTC GCGAAGCTGA AAAATTCGGG ATAAAAACGG GGAATCTGTC GATTGACTTT
GAGGCCGTGA TGAAGCGGGT GCGCTCCATT CAGCAGGACG TCTACCAGGA GGCAGACGCT
CCGGAAATCT ACGAAGCGAT GGGAGTAACG GTTATCGAAG GCCGCGGAAG TTTTGCGGAC
GAGCATTCCG TCATCATTAC AAAGGAGGGC ATGGACGACC TGACGCTCCG CTCAAAAAAC
ATCGTAATCG CTACCGGAAG CAGACCGGTC ATCCCTCCGA TTGAAGGGCT TGAAACAGTC
CCCTTCCTGA CAAACGAAAC TATTTTCACT CTGGAAAAAC AACCGAAAAA ACTTCTTGTG
ATCGGAGCCG GCCCTATTGG CACAGAGATG GGGCAGGCGT TCACTCGTCT CGGGTCTGAA
GTTACCGTGT TTGATTTTGG AGAACGAATT CTCTCCCATG ATCACCCTGA ACTATCCGCA
CTGCTTCATG ACATGCTGAC CCGTGAGGGT ATCAATTTCA GGCTGAACAC GGCAGTTAAG
AAAGTAGCAA AAAAGAACAA CAGCATCGTC GTGACGGCTG AAGACAGAAA TACAGGCGAG
TCATTCTCTG TCGAAGGAGA CGCTCTTCTT GTCGCCTCAG GCAGAAAGGC AGCTATCGAG
ACGCTTAACC TTGAAGCTGC CGGAATAGAC ACACACAAAC GCGGCATCAG GGTCAATGAA
AGCTGCCAGA CATCCCGCCA CCACATCTAC GCCTGCGGCG ATGTCGCCGG AGGGCTGCAA
TTTACCCATA TGGCAGAACA CATGGCAAAG GTAGCGGCCA GCAAAATGCT TACTCATCTC
CCCATGAAGA CAGATGACAA GCATGTCCCC TGGTGTACCT ACACGGAGCC TGAATTGGCC
CATGTAGGTG AGACCGAAGA AACACTCAAA AAGAACAACA CCGGATATGA GCTCTACCGG
TTCCCGTTCA ACAGAATTGA CCGGGCTATA ACGGAAAGTG AAAAGCAAGG CTGGATACGG
GTCTATGCCG CCGGTTTTGA CGGGAGGATC TTCGGTGTCG ATATTCTTGG CGTTCATGCG
GGAGAACTGA TCAGCGAGTT TGCGCTCGCG ATGCGTAACG GAGTGACGCT CCGTCAGATG
TCCGATACCA TCCACCCCTA CCCTACCTAT GCCCTGGGAA ACAGAAGAGC TGCAGACCAG
TGGTATGTCC GAAAACAGTC GGGCGCACTG GTAGGACTTC TCCAGTTCTT TTTCGGCTAT
CAGGGTAAAA TGCCGGATAC CAGCGACCCG GACAGAATTG TATAG
 
Protein sequence
MNFDFDVIVI GGGAAGLTAA GVSASLGAKT AMIEKKKLGG DCTWYGCIPS KALLKSAKVA 
QTVREAEKFG IKTGNLSIDF EAVMKRVRSI QQDVYQEADA PEIYEAMGVT VIEGRGSFAD
EHSVIITKEG MDDLTLRSKN IVIATGSRPV IPPIEGLETV PFLTNETIFT LEKQPKKLLV
IGAGPIGTEM GQAFTRLGSE VTVFDFGERI LSHDHPELSA LLHDMLTREG INFRLNTAVK
KVAKKNNSIV VTAEDRNTGE SFSVEGDALL VASGRKAAIE TLNLEAAGID THKRGIRVNE
SCQTSRHHIY ACGDVAGGLQ FTHMAEHMAK VAASKMLTHL PMKTDDKHVP WCTYTEPELA
HVGETEETLK KNNTGYELYR FPFNRIDRAI TESEKQGWIR VYAAGFDGRI FGVDILGVHA
GELISEFALA MRNGVTLRQM SDTIHPYPTY ALGNRRAADQ WYVRKQSGAL VGLLQFFFGY
QGKMPDTSDP DRIV