| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1394 |
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| Symbol | |
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| ID | 6375072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1509226 |
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| End bp | 1509984 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642683889 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001959803 |
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| Protein GI | 189500333 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00739159 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000116023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTTT CTGGAAAAAT CGCACTTGTC ACCGGTGCGG CTGGGGGTAT CGGCAGTTCT
ACCGCACTAT GTCTGGCCGG GGAAGGTGCA ACGGTCGTTC TCTCGGACTG CGATAGGGAG
GGGTGCATTG CCGTTCAGAA TCAGATTCTT GAGTTAGGTG GCTCAGCATC GGTCATTACG
GCCGACGTTA CGAAAGAGCA GGAGGTCGTA GGCCTTTTTG CCGAACTGAA TGCATCTGTG
GGTTCGCTTG ACATCCTTGT CAATATCGCG GGAGGTGATC GGGAACCCGT GGCCGATGTC
GATGCGATCG ATTACGATAG CATGAGCCGC AACCTGGACC TCAATCTGAA ATCATGTATT
CTTTTCTGCC GCGAAGCCGT GCGTGTCATG AGGTCCCGGC GTTACGGGAG GATCATCAAT
ATGAGTTCGC TGGTCTACAG GGGAAGTCCC GGGCAGTTTT CCTACTCCGC CGCCAAAGGA
GGGATTTTCT CTTTTACCCG TTCGCTTGCC ATGGCCGTCG GCAAGGACAA CATAACGGTC
AATGCACTGG CTCCCGCCCT TGTGGACGTG CCTGTTTTCG AACGTGTGCT GGGCGCGGAA
CGCTGGAAGG CGATGTCCTC CGATGCGGCG TCACGCTACC CCATGCAGCG TATCGCGACC
CCTGATGACG TCGCCCGGGC GGCTCTGTTT TTCGCCTCTG ACGACGCGTC GTTCATTACC
GGACAGATTC TTGAGATTTC CGGGGGTGCC AGACTATGA
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| Protein sequence | MKLSGKIALV TGAAGGIGSS TALCLAGEGA TVVLSDCDRE GCIAVQNQIL ELGGSASVIT
ADVTKEQEVV GLFAELNASV GSLDILVNIA GGDREPVADV DAIDYDSMSR NLDLNLKSCI
LFCREAVRVM RSRRYGRIIN MSSLVYRGSP GQFSYSAAKG GIFSFTRSLA MAVGKDNITV
NALAPALVDV PVFERVLGAE RWKAMSSDAA SRYPMQRIAT PDDVARAALF FASDDASFIT
GQILEISGGA RL
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