Gene Cphamn1_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1350 
Symbol 
ID6375028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1466106 
End bp1467302 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID642683847 
ProductATP-grasp domain protein 
Protein accessionYP_001959761 
Protein GI189500291 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA TACTTGAAGG GTCGGCAATG AAATTTTTTG ACAAGTGGGG CATTCCTGTG 
CCAAACTACG TTGTTGTCAT GGACCCGAAC AGACTGGCAC AGCTTGGCGA AGCCAACAAA
TGGCTTAGGG AATCGAAGCT TGTTGTAAAA GCTCACGAGG CTATCGGTGG ACGTTACAAA
CTCGGACTTG TAAAGCTTGG CCTCAATCTG GAGGAGGCTG TAGAAGCTTC GCGCGAAATG
TTGGGTAAGA AAATCGGCAC TGCCGAGATT CGTCAGGTAA TCGTTGCTGA AATGCTTGAT
CATGACGCAG AGTACTATCT CTCCATGAAC GGCAATAAAG ATGGAGCAGA ACTGCTTGTA
TCCAAACATG GCGGTGTTGA TATTGAAGAC AACTGGGATA CAGTAAAGCG TATTCAGGTG
CCTCTCGATG AAGCTCCCTC TATTGAAGAA TTGACAGCTC TTGCTGAAAG TGCCGGATTT
GAGAAGGAAA TCGCAGAACG TGTCGGCAAA ATCGCTTCCA GGCTGCTTCT CTGTTTCGAT
AACGAAGATG CGCAGTCTAT TGAGATCAAT CCGCTTGTTA TTCGCAAAAG CGATATGCGT
TTTGCCGCAC TTGACGCGGT CATGAACGTT GACTGGGACG CAAGGTTCCG TCATCCGGAC
TGGGATTTCA AGCCGGTATC TGAAATCGGT CGTCCTTTCA CCGAGGCTGA ACAGCAGATC
ATGGAGCTTG ATGCCAGGAT CAAGGGTTCT GTTAAATTTG TCGAAGTCCC CGGTGGGGAA
GTGGCACTGC TTACTGCAGG CGGCGGAGCT TCTGTCTTTT ATGCTGATGC TGTGGTGGCC
CGTGGAGGTT CAATAGCCAA CTACGCAGAG TACTCCGGCG CACCCCCGGA CTGGGCGGTT
GAGGCATTGA CGGAAACTCT CTGCAAACTT CCGAACATCA AGCATATCAT TGTCGGGGGC
GCTATCGCCA ACTTTACCGA TGTCAGGGCG ACGTTTGGAG GTATTATCAA CGGTTTGCGT
GAAAGCAAGA CTAACGGTTA TCTGAAGGGA GTTAAAATCT GGGTTCGTCG TGGTGGTCCG
AATGAAGCCG AGGGACTTGC TGCAATCAGT AAACTCAAAG ATGAAGGTTT CGACATACAT
GTTTACGATC GAAACATGCC TATGACCGAT ATCGTAGATC TTGCCATGAA TTCCTGA
 
Protein sequence
MAKILEGSAM KFFDKWGIPV PNYVVVMDPN RLAQLGEANK WLRESKLVVK AHEAIGGRYK 
LGLVKLGLNL EEAVEASREM LGKKIGTAEI RQVIVAEMLD HDAEYYLSMN GNKDGAELLV
SKHGGVDIED NWDTVKRIQV PLDEAPSIEE LTALAESAGF EKEIAERVGK IASRLLLCFD
NEDAQSIEIN PLVIRKSDMR FAALDAVMNV DWDARFRHPD WDFKPVSEIG RPFTEAEQQI
MELDARIKGS VKFVEVPGGE VALLTAGGGA SVFYADAVVA RGGSIANYAE YSGAPPDWAV
EALTETLCKL PNIKHIIVGG AIANFTDVRA TFGGIINGLR ESKTNGYLKG VKIWVRRGGP
NEAEGLAAIS KLKDEGFDIH VYDRNMPMTD IVDLAMNS