Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1318 |
Symbol | |
ID | 6374996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1429368 |
End bp | 1430087 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683815 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001959729 |
Protein GI | 189500259 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.852602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA TAACAGCCGC ATCGCTCAAC CCCTCTTCGA TCTATTGCGT CGGAAAAAAC TACCAGCTCC ACGCTGAAGA AATGCTGCAA TGGGAGTCGG AAGGCGAGGC AGTCAGGAAA ACAGCCGAAA AGCCGCAGGA ACCGATTATC TTCCTCAAAC CCTCCTCTTC CCTTTCCTCC ACGAAAAAAA CATCGATCCC TCACTATCGC GGAAAACCCG TATCCCGCAA CATGCACTAT GAGACCGAAC TGGTCGTGCT TATCGGCCAA GACGCGGACA GTGTTGCTGA AGAAGAAGCC CTCTCCTGTG TCGCGGGATA CGGCATAGGG CTCGATATGA CACTGCGTGA TGTGCAGATG GACGCAAAAG GCAGAGGAGA GCCCTGGCTC AAGTCCAAAG GGTTCAAAAA CAGCTCTCTG GTGTCAGACT TTATTCCAGC AGATGATATC CCCGATCCTG AGAAGCTTGC ATTTGAACTC ACGCTCAACA ACACCACCGT CCAGAATGGC CGGGCCGAAA AAATGCTGTT TGACATTCCT GTGCTGATCT CCTATTTGTC GTATATTTAC GGACTACAGT CGGGAGACCT CCTGTTTACA GGAACCCCTG AAGGAGTCGG TCAGGTAAAG AACGGCGACA CACTGCGTGC GCAACTCTTC CTGAACAGCG ATCGCGGCCC CGAGCTGCTG ACTGTTCTCG ACGCGGCCGT CGAAAAGTAA
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Protein sequence | MKRITAASLN PSSIYCVGKN YQLHAEEMLQ WESEGEAVRK TAEKPQEPII FLKPSSSLSS TKKTSIPHYR GKPVSRNMHY ETELVVLIGQ DADSVAEEEA LSCVAGYGIG LDMTLRDVQM DAKGRGEPWL KSKGFKNSSL VSDFIPADDI PDPEKLAFEL TLNNTTVQNG RAEKMLFDIP VLISYLSYIY GLQSGDLLFT GTPEGVGQVK NGDTLRAQLF LNSDRGPELL TVLDAAVEK
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