Gene Cphamn1_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1318 
Symbol 
ID6374996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1429368 
End bp1430087 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID642683815 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001959729 
Protein GI189500259 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.852602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TAACAGCCGC ATCGCTCAAC CCCTCTTCGA TCTATTGCGT CGGAAAAAAC 
TACCAGCTCC ACGCTGAAGA AATGCTGCAA TGGGAGTCGG AAGGCGAGGC AGTCAGGAAA
ACAGCCGAAA AGCCGCAGGA ACCGATTATC TTCCTCAAAC CCTCCTCTTC CCTTTCCTCC
ACGAAAAAAA CATCGATCCC TCACTATCGC GGAAAACCCG TATCCCGCAA CATGCACTAT
GAGACCGAAC TGGTCGTGCT TATCGGCCAA GACGCGGACA GTGTTGCTGA AGAAGAAGCC
CTCTCCTGTG TCGCGGGATA CGGCATAGGG CTCGATATGA CACTGCGTGA TGTGCAGATG
GACGCAAAAG GCAGAGGAGA GCCCTGGCTC AAGTCCAAAG GGTTCAAAAA CAGCTCTCTG
GTGTCAGACT TTATTCCAGC AGATGATATC CCCGATCCTG AGAAGCTTGC ATTTGAACTC
ACGCTCAACA ACACCACCGT CCAGAATGGC CGGGCCGAAA AAATGCTGTT TGACATTCCT
GTGCTGATCT CCTATTTGTC GTATATTTAC GGACTACAGT CGGGAGACCT CCTGTTTACA
GGAACCCCTG AAGGAGTCGG TCAGGTAAAG AACGGCGACA CACTGCGTGC GCAACTCTTC
CTGAACAGCG ATCGCGGCCC CGAGCTGCTG ACTGTTCTCG ACGCGGCCGT CGAAAAGTAA
 
Protein sequence
MKRITAASLN PSSIYCVGKN YQLHAEEMLQ WESEGEAVRK TAEKPQEPII FLKPSSSLSS 
TKKTSIPHYR GKPVSRNMHY ETELVVLIGQ DADSVAEEEA LSCVAGYGIG LDMTLRDVQM
DAKGRGEPWL KSKGFKNSSL VSDFIPADDI PDPEKLAFEL TLNNTTVQNG RAEKMLFDIP
VLISYLSYIY GLQSGDLLFT GTPEGVGQVK NGDTLRAQLF LNSDRGPELL TVLDAAVEK