Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1302 |
Symbol | |
ID | 6374980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1414920 |
End bp | 1415909 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683799 |
Product | basic membrane lipoprotein |
Protein accession | YP_001959713 |
Protein GI | 189500243 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTG TTTTTCTCGC GGGATGGGGA TGTTCAACCA GGACTCCGTC TGACGGAGCC TCGGATGTCA TGACTGTGGG AATGGTTTTT GACGTGGGCG GTCGTGGAGA CAAATCCTTC AACGATGCGG CCTATCATGG CCTGGAACTC TCCAGAGATT CTCTTGGAGT GGAGATTCTT TATATTGAGC CGTCCGGTGA AGGGGCTGAT AGAGAGGCTG CATTGCGCCA GTTGGCTGCA GACCCGGATG TGGGTCTGAT TTTCGGCGTC GGTTTGCTTT TCAGTGAAGA TATTGCTGCA ATAGCTGAAG AATTTCCTGA CAAGAAATTT GCTTGTATCG ATTATCTCTC TCAACCGGGC GAGCAGATTC CTGCCAATTT TTCCGGCATA GTTTTTCAGG ATAAAGAGGG TTCTTTTCTG GCCGGAGCAA TTGCCGGTCT CGAGACTGAA ACAGGTCTTG TCGGCTTTAT CGGAGGTATG GAATCAAGTA TCATCAGGCG GTTTCAGGAG GGGTTTACCG AGGGGGCGAA AATGGTGAAT CCGGATGTTA CTGTTATATC AGGCTATATC GGCATGACCG GCAGCGCGTT CACCAATCCT GCTAAAGGCA AAGAACTTGC TCTCGGTCAG TATGCAAAAG GCGCGGATAT TATCTATCAG GCTGCAGGAG CGAGCGGTCT TGGTGTAGTC GAGGCAGCGC GTGAGACTGA TAACCTGGTT ATCGGAACAG ATCGCAACCA GGAGGATCTT GCTCCTGGCT ATGTATTGAC AAGCGTCACC AAAGCGATTG ATCGCGCGGT TTTTACGACG GCCGAGCAGC TTTTGAAAGG GGAATTTTCC GGAGGCAAGG TGAATGTTTT CGGCCTTGAG GGCCGGTATA CCGATTATGT CTATAATGAC AACAATGCTG ACCTGATCAA CACTGAAACA CATGTCAGGG TTGAGAAGAT CAGAGAGCAG ATTATTCATG GAGAGTTGAA AATGAAATAA
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Protein sequence | MLVVFLAGWG CSTRTPSDGA SDVMTVGMVF DVGGRGDKSF NDAAYHGLEL SRDSLGVEIL YIEPSGEGAD REAALRQLAA DPDVGLIFGV GLLFSEDIAA IAEEFPDKKF ACIDYLSQPG EQIPANFSGI VFQDKEGSFL AGAIAGLETE TGLVGFIGGM ESSIIRRFQE GFTEGAKMVN PDVTVISGYI GMTGSAFTNP AKGKELALGQ YAKGADIIYQ AAGASGLGVV EAARETDNLV IGTDRNQEDL APGYVLTSVT KAIDRAVFTT AEQLLKGEFS GGKVNVFGLE GRYTDYVYND NNADLINTET HVRVEKIREQ IIHGELKMK
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