| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1290 |
|---|
| Symbol | |
|---|
| ID | 6374967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1402415 |
|---|
| End bp | 1403395 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642683787 |
|---|
| Product | rfaE bifunctional protein |
|---|
| Protein accession | YP_001959702 |
|---|
| Protein GI | 189500232 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.106058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.821378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG ACACACTTTT TAACTCCTTC AGAAAAAAAA AGATAGCGGT TGTCGGCGAT
ATAATGCTCG ACAAGTATAT TTTCGGACAT GTATCACGCA TCTCCCCTGA ATACCCGGTA
CCTGTTGTTG ATGTCACTCA CGAAACTCTA CGGTTGGGCG GAGCAGCCAA TGTAGCCATA
AACGTTCATG CCATGGGAGC CTCAACCATG CTTCTCGGTA TCACAGGGCG GGATGACAAC
GCGGAAGCCC TGAAAAGGCT TATGCACAAA CACGGGCTGG AATCCCCCCA CCTTTTCCAG
GACCCGTCAA GGCCGACAAC ATGTAAAACC AGGATCCTCT CTCAAAACCA CCATATTGCA
AGAGTGGACA ACGAAAGCCG CGAAGCGATT CCGGAGGCTG CCGAGAACTT CATAGAAGAG
CAGCTTAGAG AGGCGATCGA CGAATTGGAC GGCGTTGTGC TTCAGGACTA TAACAAAGGA
GTACTCACCC CCAGCCTGAT AGAACGCATC ATTTCGTTAG CCTCATCGCA TGAGGTGCCG
GTCTTCGTCG ACCCGAAACT GGAGAGCTTT TTCAGCTATA GGGGCTGTAC TGTTTTCAAA
CCGAACCTTG CCGAAACCGC ATCTTCTCTC GGTATCACCC TGAAGAACAC CGACAGGGAT
ATCGAAGATG CCTGCAGAAA GCTGAAGGAA GTCCTGCAAT GCGAGCATCT CGTCATCACA
AGAAGTGAAA AGGGCCTGAC GACCTTCAAT GAGCGCTTTA CCCATATTCC AGCCGCATCT
CTGGATGTTG CCGATGTATC AGGCGCCGGA GATACGGTAA TAGGAATCCT TTCCCTGGGA
GTTGCCTCAG GACTGGATAT CGAAACAAGT GCTCAGATGG CCAACCTTGC AGCAGGAACT
GTTTGCCAGG AGGTGGGAGC GGTACCCGTG AACCCTGAAA AGCTCAGAAA AGCCTGCGTC
AGTCACTTCA ATGAAGAATA G
|
|---|
| Protein sequence | MNIDTLFNSF RKKKIAVVGD IMLDKYIFGH VSRISPEYPV PVVDVTHETL RLGGAANVAI
NVHAMGASTM LLGITGRDDN AEALKRLMHK HGLESPHLFQ DPSRPTTCKT RILSQNHHIA
RVDNESREAI PEAAENFIEE QLREAIDELD GVVLQDYNKG VLTPSLIERI ISLASSHEVP
VFVDPKLESF FSYRGCTVFK PNLAETASSL GITLKNTDRD IEDACRKLKE VLQCEHLVIT
RSEKGLTTFN ERFTHIPAAS LDVADVSGAG DTVIGILSLG VASGLDIETS AQMANLAAGT
VCQEVGAVPV NPEKLRKACV SHFNEE
|
|---|
| |