| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1250 |
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| Symbol | |
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| ID | 6374927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1355547 |
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| End bp | 1358099 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642683748 |
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| Product | CRISPR-associated protein, Csm1 family |
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| Protein accession | YP_001959663 |
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| Protein GI | 189500193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00529102 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGATA CAGAAAGAGA CTCGTTTTAC CTTGGCGCAC TGCTGCACGA TATCGGCAAG
TTTATACAGC GAGCCGAGAT CGATGAGTGG AAAGAGCGTG CTGACGAATA TGTCAAAAGC
GGTGATGCAT CGAAAGGTGA TTATACACAC AAGAGGTATT CAGCGGCTTT TATCAAGAAG
TTTCGCAATA AAACGGGGAT TTTTCCGCAA GATGCTGCTG CTGAATCTTA TGCCCTCTGG
CATCATCGCG GGAAAGATCG CTCAAAATTT GACAACGAAA GCATCAATAA AAAAGGTGTT
CCGCTAAAGC TGATTCATAT TGCCGATATC TCGGCTTCCG AAGAACGTCA GACCGATGCA
GAAATTGATT CGCAGGATTA CAACCTTGCA AAACTCGAAT CCATATTCTG CAATGTTGCT
CTCAGAAACA GTGATGAACA ACTAAACAGC TTTCCCGAAA AGCGATATAT AAACCTTGGA
ACTCTGACGT GCAAATATGA ATCAGCGTTC CCTTTGTCGA AAGAGCCTGC ATATCATGAA
CAGAATTACA CAACGCTTGT TAATGAATTT CTTGCGGGTT TTGAAAAATC AATAGGAAAA
ACCAAAGAAC TTCAACCGTT CCTTGTCAAG TACCTTCATG CTGTTCCAGC CCAGACTCCT
TTTAAAAAAA AGGATCATCA AGAACCATAT AGGCCAGACA TAAATCTTTT CGACCATTCA
CGGGTGACAG CGGCCATAGC ACTTTGTTTG TATGACGAGT GGATACAAGG GGATTGGAGA
GGAAAGGATA AACAGATTCT GGATGACACG GAAAATGGAT ATAAAAGTTC GGGTTTTTCT
GCGCCGTGTC TGCTTGTTTC CGGCGACATA TCGGGCATAC AGGATTTCAT CTTCAACGTT
CCGTCGAAAG GTGCGGCGAA AACACTGAAA GCGCGTTCGT TCTTTGTCCA GATGCTTGCC
GATGTGTGTG TGCAAAAAAT TCAGGATACG CTTGATCTGA AACCAGCTAA TCTGCTCTAC
AACGGCGGAG GGCAGTTTTA TTTCCTCGTG CCGAAATGCA GGGCCCAGGA TTTGAATGAT
TGCAAGGAGG ACATTGCCCG TGCTTTGATA GATGAGGAGT TGTTTTTATC AATTGCGAGT
GTCGAAGTGA AGGTGTTCGA TTTTATGAAC AATTTCGGCA AAAAATGGAA GGGTGTCAAT
GATAAGTTGA GCATCGAGAA GCTCAGAAAG TTCAAGGGGC AAAAGCGGAA AGATGTTTTT
GGCCCTTTCA AACAGGTGAT ACGTGAAAAT AATGAGAGAG ACCCGTTTTT CGAAATTACG
GACAAGAAGT TCAGGAAGAA TGACTATTAC CGCATCTTAG CGGAGAGTTC AGGTGTCAAG
GTGCCAGAAG AAGAAGAGAA GAAATCCTGG GTTGATATTC TCGGAAAGCT TGGATACCGT
TTTGAGTTTC AAGTAATGGG ATCGACTGAT GCCGTTGCTT TCAATACCAC AGATTTCGAG
GAAAAGTGTG CCGGTTTCAG ATTTTCTGTC AAAGATTTGC CGCATTGGAG GACTGTGGCA
TCGATAGAGC AGTTCAAACA GGATGTCGAG AACTGTGGCC GTTCAGTTGA AGAGTATTAT
GATAAAGATA AAGACGGTAA GAGATGGGGG TTAAAACCCG ATAACATCAT TACCTATTCA
CAGCTTGCCT TCAAGGCGTA TAAGGAAACC GGTACCCACA AGCTCGGTAT CCTGAAAATG
GATGTTGATA ATCTGGGACA AATTTTCTCC GATGGATTTC CGGAGGAGAT CAGAACTCCT
TCACGGATGA TGTCCCTGTC GCGATCCTTG CAGTGGTTTT TCGAAGGCTA CATGAACACC
TTGCTTGAAG ACGAGGAGTT CAGGGATTAT TTGTATCCGA TCTTTTCCGG CGGCGACGAT
CTGTTCATCG TCGGCGCATG GCACAAAGTG TTTGACATTG CCTTGAGGAT TCAGAAGGAT
TTCCGGCAGT TTGTCTGCGA GAATCCTTCG GTAACCCTGT CGGCATCCCT GCTGGTCGTT
GACGAGCATT ATCCGGTGTC GCGATTCGCC GTGCTTGCAG AAGAGCGTCT GCACGAAGCC
AAATACGGGA GTCTTGACAA GAACTCGGTC AACGTGTTCG GTCAGACGTT GAGCTGGGTG
GAGTTCGGGA GAGCCTGCGA GATCAAAGAG AAACTTGTCA GAATGGTTCT GGAGCTGAAG
GAGCCGAAAG CGATCATTCA AAAGGTGCTT CAGGGGTGCA AAGGGCTCGA GGTGCTGTGC
GATCGTGCCG TCAGACATCG GAATGTGAGT AGCGAGAGGA ACCTTCAGGG CTTGTCGGTA
CTGGACCGGG AAAAGCCTGC CGGTGAAAAG GTGTGGCAGA TGGCCTGGTT CCTGAGAGAC
ATCGAAAAGG AAGAGTCCCG ACCGATTGCC GAGGAGATTG TCGGAGAGTA CGAACGGGTT
GTCTTTGCTG CCATGAAGGG CGAAACAGTG AACCCGATGT ATATTGCTGT TGGAGCCCGC
TGGGCTGAAT TTAGCTGTAG AAAATCACTA TAA
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| Protein sequence | MSDTERDSFY LGALLHDIGK FIQRAEIDEW KERADEYVKS GDASKGDYTH KRYSAAFIKK
FRNKTGIFPQ DAAAESYALW HHRGKDRSKF DNESINKKGV PLKLIHIADI SASEERQTDA
EIDSQDYNLA KLESIFCNVA LRNSDEQLNS FPEKRYINLG TLTCKYESAF PLSKEPAYHE
QNYTTLVNEF LAGFEKSIGK TKELQPFLVK YLHAVPAQTP FKKKDHQEPY RPDINLFDHS
RVTAAIALCL YDEWIQGDWR GKDKQILDDT ENGYKSSGFS APCLLVSGDI SGIQDFIFNV
PSKGAAKTLK ARSFFVQMLA DVCVQKIQDT LDLKPANLLY NGGGQFYFLV PKCRAQDLND
CKEDIARALI DEELFLSIAS VEVKVFDFMN NFGKKWKGVN DKLSIEKLRK FKGQKRKDVF
GPFKQVIREN NERDPFFEIT DKKFRKNDYY RILAESSGVK VPEEEEKKSW VDILGKLGYR
FEFQVMGSTD AVAFNTTDFE EKCAGFRFSV KDLPHWRTVA SIEQFKQDVE NCGRSVEEYY
DKDKDGKRWG LKPDNIITYS QLAFKAYKET GTHKLGILKM DVDNLGQIFS DGFPEEIRTP
SRMMSLSRSL QWFFEGYMNT LLEDEEFRDY LYPIFSGGDD LFIVGAWHKV FDIALRIQKD
FRQFVCENPS VTLSASLLVV DEHYPVSRFA VLAEERLHEA KYGSLDKNSV NVFGQTLSWV
EFGRACEIKE KLVRMVLELK EPKAIIQKVL QGCKGLEVLC DRAVRHRNVS SERNLQGLSV
LDREKPAGEK VWQMAWFLRD IEKEESRPIA EEIVGEYERV VFAAMKGETV NPMYIAVGAR
WAEFSCRKSL
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