Gene Cphamn1_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1216 
Symbol 
ID6374893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1319761 
End bp1320669 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID642683714 
Producthypothetical protein 
Protein accessionYP_001959629 
Protein GI189500159 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.256676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAT TTCAGAACGT GCTGCTGATG GTGGCCGTAC TCATATCGGT AGTGTTCAGC 
CGGTCATTGC CGGCTGAGGA GTCTCTGCTT TCGAGATATG ATATGAAAAA CCCGTCTTCC
AAACTGAAGC TTCCTGCGGA GCTGAAGGAG GTTTCAGGAA TTACAGTATC TGAAAACGGC
CGTCTTTTCG CCCAGAATGA TGAAGAGGGG ACGGTATATG AACTCGATCA CGATACCGGA
AAGATCAGAA AACGATTTTC TATCCGGGAA AAACGCTGGT TTGGTGATTT TCCTGTCGAT
GGTGATTTTG AAGACATCGT GCTTGCCGGT AATCGTTTTT TCATGGTTAC CAGCGCAGGG
GTGCTTTACG GGTTTTCCGA AGGCAAGGAC GGCCAAAGCG TGCAATCTCA GAGGTATGAG
ACCGGACTCA ATGATCTCTA TGACGTTGAA GGGCTCTGTT ACGATCCCGA GACTGAATCG
CTGCTTCTTG CCTGTAAAGA GTATCCGAAG CGGTTATCAT TGAAGCAGCT CCTGGGTAGA
GAAAAAAAGA AATCCAAAAT CAGGGAGAAG CCGGTGTATG CATTTTCCCT GAATACCATG
ACTTTTGATA GATCGCCGCG ATTTCTCATT GACGTCAGTG TATTTATGAA AAAGGGCAAA
CGTGTGAAAT TCAAACCATC AGCGATTACG CGTCATCCCG GTACGGGAAA TTTTTTGGTG
CTTTCTGCTG TCGGGAGGCT GCTTGTGGAA ATTACTTCTC AAGGAACTCT TGTGGATGTT
GTCAAGCTTT CGTCAAAAGA TCATCCTCAG CCTGAAGGTA TTGCTTTAAC TGCAGATAAT
GAGATGCTGA TCAGTAATGA AGGGGTCTCC GGAAAAGCAA CGCTGCTGCG ATACAGTATG
CGTAAGTAG
 
Protein sequence
MSRFQNVLLM VAVLISVVFS RSLPAEESLL SRYDMKNPSS KLKLPAELKE VSGITVSENG 
RLFAQNDEEG TVYELDHDTG KIRKRFSIRE KRWFGDFPVD GDFEDIVLAG NRFFMVTSAG
VLYGFSEGKD GQSVQSQRYE TGLNDLYDVE GLCYDPETES LLLACKEYPK RLSLKQLLGR
EKKKSKIREK PVYAFSLNTM TFDRSPRFLI DVSVFMKKGK RVKFKPSAIT RHPGTGNFLV
LSAVGRLLVE ITSQGTLVDV VKLSSKDHPQ PEGIALTADN EMLISNEGVS GKATLLRYSM
RK