| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1104 |
|---|
| Symbol | |
|---|
| ID | 6374778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1189022 |
|---|
| End bp | 1189450 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642683605 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001959523 |
|---|
| Protein GI | 189500053 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2510] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC CCGCTCTTCT TCTGTCGCTC GTCATAACAG TTTCAATACT TGGTTCATTG
CCGATTCTGG AAAAAATAAC GCTGGCACGA ATGAATGTCA CGCAGATGAT TTTTCTCAGA
AGTCTTTCCC AGACAATCAT ACTCGGTATC GTTGTCTGGC TTGGAACATC CTCGGTTCAA
GGCGGTATAC CGATAAAATA TACAATATAC GCCCTTCTTC AGGGAGTCGC CATCACCGTC
ATGCTTTTCT TCTATCTTTC AGCCATAAAA ACAACCGAAG TCTCTTTCGT CAACCCGATC
ATTGCCGCCG CTCCACTTAT AACCTATGCA ATGGCTGTGT TTATACTCAA CGAGCAATTC
AATCCGGTAA GGCTTTCAGG GGTAATTCTC GTTGCAGGAG GTGTCGCGCT GATTCTCTAT
AGCCGGTAA
|
|---|
| Protein sequence | MKTPALLLSL VITVSILGSL PILEKITLAR MNVTQMIFLR SLSQTIILGI VVWLGTSSVQ
GGIPIKYTIY ALLQGVAITV MLFFYLSAIK TTEVSFVNPI IAAAPLITYA MAVFILNEQF
NPVRLSGVIL VAGGVALILY SR
|
|---|
| |