Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1066 |
Symbol | |
ID | 6374740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1151299 |
End bp | 1154406 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683568 |
Product | acriflavin resistance protein |
Protein accession | YP_001959486 |
Protein GI | 189500016 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0284295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000200954 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATCAC TGTTCCGTTT TTTTGCTGAG CGTCACATGC TCGCGTACCT CATGACGATC CTGGTCTTTC TGTTCGGCAT GGCTACGCTT TGGCAGATCA ACCGGGCTCA GTATCCGAAG GTGGACCTGG GTCAGATGGT GGTGACGACA AATTATCCCG GGGCTGCGCC GGAGGACGTC GAACTCAATG TCACCAACAA GATCGAAGAT GAGCTGAAAA GTGTCACCGA TATCAAGCGG GTCTTTTCGA TGTCGATGGA AAATGTCTCT ATCGTTATTG TCGATATAGA GCCGGATGCT TCCGATGTTG ACGGGGTGAA ACGAGAGATT CGTGAAGCGG TTTTTCGAAT AACGGATTTT CCAGAGGAGG TGACGGAATC TTCACTGATC ACGGATATCA AATCATCTAT TTTCCCTATT CTTGAAGTTG GTCTGACGGG TGATAAGCCC TATCCGGAAT TGCGGGAGCT TGCCCGCAGG TTCGAAAAGA AGCTCAAGGA CATTCCGGGC GTGGCGAGCG TGCAGCGTTA CGGTTACCGC GACAGGGAGA TACAGGTCGA GCTGTATCCC GGGAAAATAA GAGAGCTTCA GGTTCCCATG CAGGAAGTTG TGGATGCTAT TCAGCAGCGA AACATACGGG CAACCGGAGG TTCGCTTGAA TCGTTTACCA GTGAGAAAAA CCTTGTTACC CTTGCCCAGT TCCGCGATCC CCGGGAAGTT GGAGATGTTG TCGTGCGTTC AAGTTTCGAC GGACCGATTA TCAAGGTTGC CGATATAGCC GATGTTACCG ACAGTTTCGA AGAAGAGCGG GTTTTGTCGA GAATCAACGG GCATCCGGCT ATCTCGTTTC TGATCAACAA AAGTGAATCG GCTGATATTA TTCGTACGGT AGAGGCGATC AGGGATCTGG TCAGTGAAGA GGAGGCTCTG CTGCCGGAGG GCGTAAGGTT TATTTATGGC CTCGACTTTT CACAATATGT GGCCAACCAG CTTACCATTG TCATGACAAA CGGCGGAATC GGTCTTGTGC TCGTCATGAT CGTTCTTGCC CTGTTTCTCA ATATCCGGAC CGCATTCTGG GTGGCTCTCG GTATTCCTTT TACGCTGCTT GGCGGTATTT CCCTGCTTCC GCTCTTCGAT GTCGAGCTCG ATACGGTGAC GCTTACCTCC CTGATCATCG TCATCGGTAT TGTTGTCGAT GATGCCATTA TCATATCCGA AAACATTTTT CAGCGTCGCG AACGCGGCGA GTCTCCTATC GAAGCGGTGG TCAACGGTAT CTATCAGGTG TACAAGCCTG TGCTGACGAC TGTTCTGACA ACCTTTCTTG CGTTCGCTCC AATGTTTTTC ATGCCGGGCA TCCTCGGTAA ATTTGTTTTC GTGATCCCGT TGACCATTTC GCTTGCTCTT TTTGTTTCAC TCATCGAAGC ATTCCTGATT CTCCCGGCAC ATGTGATGCC CGGACTGTAT ACGAGAGAGG GAGAAGATCC CAAATCCACC ATGCGCAACT GGTTTGTACC GATACGTGAC ATGTTTGAAA AGGTTCTTCA TTCAATGCTG CGTTTCCGGT ACGTTTTGGT ATTTTTTGCA CTGCTCTCGT TTGGCGGGGC TCTGTTTTAC GGCCTGAATT ATATCAGCTA TATTCTTTTT CCGACAAAAG GATCCGATGC GTTCAATATC TGGATCGAGG TTCCTGTTGG AAGCTCTCTC AAGACAACCT CTGATAAAGC CGCCGAGTTT GAAAAATTAA TAGGGGTTTT GCCTGAAGAT GAGCTGGATG CCTATCTGAC AAGAATCGGA ACACAGGCGG ACATTGTCCC GATCGAGCAG GAAAATTTTG CCGAGCTTGC CGTCAAGCTT ACACCATACG GGACACGGGA AAGATCAGCG GATGAAATTG TGGACGATAT CCGTGAAAAA GCTAAAGAGA TCACCGGTAT CTCGCAGACA ACTTTTTTCG TTGAATCCGG AGGTCCCCCT GTCGGTAAGC CTGTCACGAT ACGTGTTGTC GGTTCCGACG ATTCGCTGAG GACTGCTCTT GCCGATTCAG TCTTCAACTA TCTCGGCGCA ATTCAAGGTG TTACTGACCC GGATCGCAAT GACAAGGATG GTAAGGAGCA GATTGAAATA GCAATACGCC ATGACCGCCT TGCCCGGCTC GGATTGTCGG TGGCGGATAT TGCCAGAACG GTCAGAACGG CCTATGACGG TCAGGTGGTC ACCAGCGTTC GTTACGGTGA AGAGGAGGTT GATTTCAGGG TGATGCTCAA GAAGTTTGCC AGAAAGAAGC TCGAATACCT TCAGGATCTT TCTATTCCCA ACAGGACGGG CAGGTTGATT CCGTTGAAAG AGGTCGCCAG TTTCGAGCAG GGTTCGGGCC CATCCATATT TCATCACTAT GATGGAGAGC GGTCAGTGAC GATTTCGGCA GATGTTAAAC AGGACACGGT CACGCCAATC GAGGTGATGA GGAATGTGGA AACGCATTTT ACGGGAACCC GCGATTTCCC AGGAATCAAA CTGGTGTTCG GTGGAGAAGC CCAGGAGTCG GAAGAATCGC TCCGGGGATT GTTCATCGCT TTCGGTGTGG CTGCTTTCGG GATTTACTTC CTGCTCATTC TCCTGTTCAA CTCCGTTACA CAGCCGCTGC TTGTGATGAT GTCGATACCG TTTGCCATCA TCGGTATCGT GATCACCTTT GCGCTGCACG GTGAGGTATT CAGCTTCCTC GGGTTGCTCG GTGTTGTCGG TATGGCCGGT GTCGTGGTCA ACGACTCGCT TGTCCTGGTA AACTACCTCA ACGAGCTTTA CCAGTCCGGG CAAACAAGGG ATATTCCTGC CCTGGTTGCA AAAGGCACCG CTGATCGTCT GCGTGCCATT CTGCTGACAA CGGTGACAAC TGCCGCCGGT CTTCTGCCGC TAGCGTACGG TATCGGCGGA ACGGATGCAT CGATGATGCC GATGGCACTC GCGCTGGGCT GGGGGCTGCT GCTCGCTACC CCTTTGACGT TAGTGCTGAT TCCCTGTCTG TACATGATCG GTTTTGATAT AAGAGATCTG TTGTCAAGGG TTTCCGGTGG AGGTAAAGGG CTCCCTGAAG ATGCGTGA
|
Protein sequence | MKSLFRFFAE RHMLAYLMTI LVFLFGMATL WQINRAQYPK VDLGQMVVTT NYPGAAPEDV ELNVTNKIED ELKSVTDIKR VFSMSMENVS IVIVDIEPDA SDVDGVKREI REAVFRITDF PEEVTESSLI TDIKSSIFPI LEVGLTGDKP YPELRELARR FEKKLKDIPG VASVQRYGYR DREIQVELYP GKIRELQVPM QEVVDAIQQR NIRATGGSLE SFTSEKNLVT LAQFRDPREV GDVVVRSSFD GPIIKVADIA DVTDSFEEER VLSRINGHPA ISFLINKSES ADIIRTVEAI RDLVSEEEAL LPEGVRFIYG LDFSQYVANQ LTIVMTNGGI GLVLVMIVLA LFLNIRTAFW VALGIPFTLL GGISLLPLFD VELDTVTLTS LIIVIGIVVD DAIIISENIF QRRERGESPI EAVVNGIYQV YKPVLTTVLT TFLAFAPMFF MPGILGKFVF VIPLTISLAL FVSLIEAFLI LPAHVMPGLY TREGEDPKST MRNWFVPIRD MFEKVLHSML RFRYVLVFFA LLSFGGALFY GLNYISYILF PTKGSDAFNI WIEVPVGSSL KTTSDKAAEF EKLIGVLPED ELDAYLTRIG TQADIVPIEQ ENFAELAVKL TPYGTRERSA DEIVDDIREK AKEITGISQT TFFVESGGPP VGKPVTIRVV GSDDSLRTAL ADSVFNYLGA IQGVTDPDRN DKDGKEQIEI AIRHDRLARL GLSVADIART VRTAYDGQVV TSVRYGEEEV DFRVMLKKFA RKKLEYLQDL SIPNRTGRLI PLKEVASFEQ GSGPSIFHHY DGERSVTISA DVKQDTVTPI EVMRNVETHF TGTRDFPGIK LVFGGEAQES EESLRGLFIA FGVAAFGIYF LLILLFNSVT QPLLVMMSIP FAIIGIVITF ALHGEVFSFL GLLGVVGMAG VVVNDSLVLV NYLNELYQSG QTRDIPALVA KGTADRLRAI LLTTVTTAAG LLPLAYGIGG TDASMMPMAL ALGWGLLLAT PLTLVLIPCL YMIGFDIRDL LSRVSGGGKG LPEDA
|
| |