| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0968 |
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| Symbol | lysS |
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| ID | 6374635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1042324 |
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| End bp | 1043871 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683469 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001959393 |
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| Protein GI | 189499923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.685874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TACAAGACCA TGCCATACCG CATGACGCAT CCTTTGATCA GGAAGCAGAG
CTGCGCAATC TGAACGACCA GATGAAAAGG CGGATCAATG AACGAAACCA GCTTTCTGAA
GAAGGCGTCC GTCCATATCC CTACCGGTTC GATGTCACCG GCTATTCAAA AACCATCATT
GCTGGATATC AGGAAGAAAA ACCGGAAACA GTCGCTGTTG CCGGCCGCAT CATGACCTTA
CGGAAAATGG GTAAGGCGTC GTTCTTCCAT ATCCAGGATA CAGAGGGCAA GATTCAGATT
TATATAAAGA GAGACGAAGT CGGACAGGAA TCCTACAAAA CGTTCAAACT GCTCGATATC
GGTGACATTG TCGGCATAAA AGGGTATACT TTCCGCACCA AAACCGGGGA AATATCCATT
CACGCTCAAG AGTTCCAGCT CCTCAGCAAG TCACTACGGC CTATTCCGGT TGCCAAGGAA
AAGGAAGTTG ACGGTAAAAA GGTCACCTAT GATGCTTTCA GTGATAAAGA AACCAGGTAC
CGTCAGCGGT ACGTGGATCT TATCGTCAAT CCGGAGGTGA AAGAAACCTT CATCAAACGC
TCAGCAATCA TCTCCTTCAT GCGTAACTTC TTTTCAGAAA GAGGGTACCT TGAAGTTGAG
ACACCGATCC TTCAGCCTGT TTACGGTGGC GCTGCCGCAA GGCCGTTCAC CACGCACCAT
AATGCGCTGA ATATGGAACT CTATCTCAGA ATTGCCAACG AACTGTTCCT GAAACGGCTC
ATTGTCGGTG GTTTTGACGG TGTATTTGAA TTCGCAAAAG ATTTCCGGAA CGAAGGAATT
GACCGTTTTC ATAATCCTGA GTTCACACAG GTAGAGCTCT ATGTCGCGTA CAAGGATTAT
TACTGGATGA TGGAACTTGT CGAAGAGCTG ATCTACCGGA CAAACCTGGC GATATCTGCA
AGCGAATCCA CGACGTTTCT CGGCCACGAG ATCAACCTGA AACCTCCCTA CAGGCGGATC
TCCATTGCCG CGGCGATTCA GGAGTACTGC GCGGTGGACA TACGGGACAA ATCCGAAACC
GAACTGAGAA ACACGGCCAA GGATCTGGGG CTCTCACTTG ATCCTAAAAT CAGCAGCGGT
AAAATCATTG ATGAAATTTT CGGCGAATTC GTGGAACCGA AACTGATTCA GCCGACCTTT
ATCATAGACT ATCCGACCGA AATGTCTCCG CTTGCAAAAG AACACCGGTC AGAAAAAGGT
GTTGTCGAGC GTTTTGAGCT TATTGTGGGC GGAAAAGAAC TCTGCAACTC TTTCTCCGAA
CTCAACGATC CTGTCGTTCA ACGTGAAAGA CTTGAAGCCC AGGCAAAACT AAGGCTGCGT
GGCGACGATG AAGCAATGAT TGTCGACGAG GATTTCCTTC GCGCTCTGGA ATACGGCATG
CCTCCCTGTG CAGGTCTTGG CATCGGGGTT GACCGGCTTG TCATGCTGCT GACCGGACAG
GATTCAATAC GGGATGTGAT CTTCTTCCCG CATATGAAAC CGGAATAA
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| Protein sequence | MTEVQDHAIP HDASFDQEAE LRNLNDQMKR RINERNQLSE EGVRPYPYRF DVTGYSKTII
AGYQEEKPET VAVAGRIMTL RKMGKASFFH IQDTEGKIQI YIKRDEVGQE SYKTFKLLDI
GDIVGIKGYT FRTKTGEISI HAQEFQLLSK SLRPIPVAKE KEVDGKKVTY DAFSDKETRY
RQRYVDLIVN PEVKETFIKR SAIISFMRNF FSERGYLEVE TPILQPVYGG AAARPFTTHH
NALNMELYLR IANELFLKRL IVGGFDGVFE FAKDFRNEGI DRFHNPEFTQ VELYVAYKDY
YWMMELVEEL IYRTNLAISA SESTTFLGHE INLKPPYRRI SIAAAIQEYC AVDIRDKSET
ELRNTAKDLG LSLDPKISSG KIIDEIFGEF VEPKLIQPTF IIDYPTEMSP LAKEHRSEKG
VVERFELIVG GKELCNSFSE LNDPVVQRER LEAQAKLRLR GDDEAMIVDE DFLRALEYGM
PPCAGLGIGV DRLVMLLTGQ DSIRDVIFFP HMKPE
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