Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0927 |
Symbol | |
ID | 6374594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1002888 |
End bp | 1005002 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683429 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001959353 |
Protein GI | 189499883 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0769186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGAA CCAATCGAGT TGGTCACTAT GTAAAGAAGT GCTTTTATGA GGGGACTCAG ATTTCCCGTT TCAATATTAT CATTGCCGCT GTTCTGGGAG CGCCTGCACA TTTCCTGTTT TATTTTGTCT TCAAGTATGT TTTTCATCTT CCTTATGAGA GCTTTGCCTT AAGGATGATT GCAACGTGCT TTTCTCTTTC TGTTCTTCTT GGCCTTGATC TATCGGAAGG TTTAGTTCGA TATTTTCGGG TTTACTGGCA TGTTGTCATC ATTTTTACTC TCCCGTTCAT CTTTACGGTC TATCTGCTGA AGAACGATTT TCATGAACTC TGGCTTTACT GGGAAATCTT CATGATTTTC GTTCTGATCA CGTATGTCCC CAACTGGCTG ATGTTTCTTT TTGATCTTCT TGTCGGTGTG ATCTGCGGGA TTGCATTCTT CGTCCTGACT ACCCCTGATA TTCGTCTCAA TCCGGACTTT GATATTTCCC TCTACTCGAT TGTGATTTTT TTCACCGTGG TGGCCGGATA TGTCTTCAGT TATAGTAACA AGAGGGGACA GATAGCGTTG GAAAAGAACT CTGCTTTACA GGCTCTTTCG GGAAGTATAG CACATGAAAT GCGTAATCCT CTCGGTCAGG TTCGCTACAA CCTTGAAGCT ATCGAGCAGA GCCTGCCCGC TTATCGGCCC GGCAGTTTGT CCATTCCGAT CAATGACGAT ACTCTTGACA AACTCTACAA GAATGTCGCC AAGAGCAAAG TGGCGGTGAA ACGTGGTTCT CAGGTGATCA CCATGATTCT CGATCAAGTC AGGGAAAAAC CGATAGACAA GAGCGGATTT GCCTATGCAT CTGCTGCAAT TGTTACGCAG AAAGCGATCG ATGAGTACGG TTTTGAATCC AGGCAGGAGC GTGAAAAAGT TCTTTTCAGC AGAGATGAGA ACTTTGTCTT CAGGGTTGAT GAGACGATCT ATGTTTTTGT CCTGTTCAAC CTGATAATGA ACGCATTGCA TTATCTCAAA TCCTGTCCTG ACGCAAGAAT TTATATATCA CTGGAGAAAG GGGTGCAATG GAACAGGGTG AAAGTGAAAG ATACAGGGCC CGGAATTCCT TCTGAAAACC TTCCCAGGCT GTTCGATGCG TATTTCACTT CGGGAAGGAA AGGCGGGACA GGTTTAGGTC TTGCCTACTG CAAGCGGGTG ATGGAATCGT TTAAAGGGGA TATCACCTGT GACTCCGTTG AGGGAGAATA CACAGAATTC ATTCTTACGT TTCCCGTCAT CTCCGGGGAT GATATCCGCA GCAACCGTGA AGAGCTTATC GCTTCCAACA AGGCGCTTTT TGAAGAGAAA CGTATTCTTG TTGTCGATGA CGAGCCGGCA GACAGGACTG TCGTAAGGGA GATTCTCGCT GATCTGGATG CGATCGTCGA AGAAGCAGGA AACGGCAGGG AGGGGCTTGA AAAGCTTTCA GCTCACCGAT TTGATTTTGT GATCATGAAC CTTGAAATGC CTGTCATGAA CGGGTATGAG GCGGTGGAAA ACATCAGGAA CGGCAAGGCA GGCAGCGAAA ACATCCTTGT GCCGATAGTG GCCTATTCAG CAGGTTCGTA TTACATTGTA CGCGGCAAAA CAAAGAAAGC GGGTATGCAG GGACTGATAT CAAAGCCTTG TGTAGAAACT GAACTTCTCA GACAGCTTGC GGCTATCTTT CACGATTGTC AAAAACACTT TCTGCAGGAT TTCACGGGTA AGTCTCTGCT TATTGTCGAT GATTCGGCTT TCAGCCGTGT AGCGCTTAAA ACGGTTCTTG AAAAGCAAGG GATGCTTGTC GATGAAGCGT TTGACGGAAT GGATGCATGC AAAAGACTTG AAAGCAAGTT ATATGATCTT GTGTTAATGG ATATGAGAAT GCCGCTGCTC GATGGTGTGG CCGCGACAAA ACGTATTCGT AAGAGCCGGG GCACAAACAT CTCTTCTGTT CCGATTATAG GTCTCAGTGG TGACTCGGAT GAGGGTTCGA TAGAAGACGC GATGCAGGCT GGTATGAATG ATTATCTCGT GAAGCCTGTA GATACAAAAG TGCTGCTGAT GAAAATCAGT CAGCTGGTAC GGTGA
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Protein sequence | MNRTNRVGHY VKKCFYEGTQ ISRFNIIIAA VLGAPAHFLF YFVFKYVFHL PYESFALRMI ATCFSLSVLL GLDLSEGLVR YFRVYWHVVI IFTLPFIFTV YLLKNDFHEL WLYWEIFMIF VLITYVPNWL MFLFDLLVGV ICGIAFFVLT TPDIRLNPDF DISLYSIVIF FTVVAGYVFS YSNKRGQIAL EKNSALQALS GSIAHEMRNP LGQVRYNLEA IEQSLPAYRP GSLSIPINDD TLDKLYKNVA KSKVAVKRGS QVITMILDQV REKPIDKSGF AYASAAIVTQ KAIDEYGFES RQEREKVLFS RDENFVFRVD ETIYVFVLFN LIMNALHYLK SCPDARIYIS LEKGVQWNRV KVKDTGPGIP SENLPRLFDA YFTSGRKGGT GLGLAYCKRV MESFKGDITC DSVEGEYTEF ILTFPVISGD DIRSNREELI ASNKALFEEK RILVVDDEPA DRTVVREILA DLDAIVEEAG NGREGLEKLS AHRFDFVIMN LEMPVMNGYE AVENIRNGKA GSENILVPIV AYSAGSYYIV RGKTKKAGMQ GLISKPCVET ELLRQLAAIF HDCQKHFLQD FTGKSLLIVD DSAFSRVALK TVLEKQGMLV DEAFDGMDAC KRLESKLYDL VLMDMRMPLL DGVAATKRIR KSRGTNISSV PIIGLSGDSD EGSIEDAMQA GMNDYLVKPV DTKVLLMKIS QLVR
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