Gene Cphamn1_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0927 
Symbol 
ID6374594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1002888 
End bp1005002 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content46% 
IMG OID642683429 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001959353 
Protein GI189499883 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0769186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGAA CCAATCGAGT TGGTCACTAT GTAAAGAAGT GCTTTTATGA GGGGACTCAG 
ATTTCCCGTT TCAATATTAT CATTGCCGCT GTTCTGGGAG CGCCTGCACA TTTCCTGTTT
TATTTTGTCT TCAAGTATGT TTTTCATCTT CCTTATGAGA GCTTTGCCTT AAGGATGATT
GCAACGTGCT TTTCTCTTTC TGTTCTTCTT GGCCTTGATC TATCGGAAGG TTTAGTTCGA
TATTTTCGGG TTTACTGGCA TGTTGTCATC ATTTTTACTC TCCCGTTCAT CTTTACGGTC
TATCTGCTGA AGAACGATTT TCATGAACTC TGGCTTTACT GGGAAATCTT CATGATTTTC
GTTCTGATCA CGTATGTCCC CAACTGGCTG ATGTTTCTTT TTGATCTTCT TGTCGGTGTG
ATCTGCGGGA TTGCATTCTT CGTCCTGACT ACCCCTGATA TTCGTCTCAA TCCGGACTTT
GATATTTCCC TCTACTCGAT TGTGATTTTT TTCACCGTGG TGGCCGGATA TGTCTTCAGT
TATAGTAACA AGAGGGGACA GATAGCGTTG GAAAAGAACT CTGCTTTACA GGCTCTTTCG
GGAAGTATAG CACATGAAAT GCGTAATCCT CTCGGTCAGG TTCGCTACAA CCTTGAAGCT
ATCGAGCAGA GCCTGCCCGC TTATCGGCCC GGCAGTTTGT CCATTCCGAT CAATGACGAT
ACTCTTGACA AACTCTACAA GAATGTCGCC AAGAGCAAAG TGGCGGTGAA ACGTGGTTCT
CAGGTGATCA CCATGATTCT CGATCAAGTC AGGGAAAAAC CGATAGACAA GAGCGGATTT
GCCTATGCAT CTGCTGCAAT TGTTACGCAG AAAGCGATCG ATGAGTACGG TTTTGAATCC
AGGCAGGAGC GTGAAAAAGT TCTTTTCAGC AGAGATGAGA ACTTTGTCTT CAGGGTTGAT
GAGACGATCT ATGTTTTTGT CCTGTTCAAC CTGATAATGA ACGCATTGCA TTATCTCAAA
TCCTGTCCTG ACGCAAGAAT TTATATATCA CTGGAGAAAG GGGTGCAATG GAACAGGGTG
AAAGTGAAAG ATACAGGGCC CGGAATTCCT TCTGAAAACC TTCCCAGGCT GTTCGATGCG
TATTTCACTT CGGGAAGGAA AGGCGGGACA GGTTTAGGTC TTGCCTACTG CAAGCGGGTG
ATGGAATCGT TTAAAGGGGA TATCACCTGT GACTCCGTTG AGGGAGAATA CACAGAATTC
ATTCTTACGT TTCCCGTCAT CTCCGGGGAT GATATCCGCA GCAACCGTGA AGAGCTTATC
GCTTCCAACA AGGCGCTTTT TGAAGAGAAA CGTATTCTTG TTGTCGATGA CGAGCCGGCA
GACAGGACTG TCGTAAGGGA GATTCTCGCT GATCTGGATG CGATCGTCGA AGAAGCAGGA
AACGGCAGGG AGGGGCTTGA AAAGCTTTCA GCTCACCGAT TTGATTTTGT GATCATGAAC
CTTGAAATGC CTGTCATGAA CGGGTATGAG GCGGTGGAAA ACATCAGGAA CGGCAAGGCA
GGCAGCGAAA ACATCCTTGT GCCGATAGTG GCCTATTCAG CAGGTTCGTA TTACATTGTA
CGCGGCAAAA CAAAGAAAGC GGGTATGCAG GGACTGATAT CAAAGCCTTG TGTAGAAACT
GAACTTCTCA GACAGCTTGC GGCTATCTTT CACGATTGTC AAAAACACTT TCTGCAGGAT
TTCACGGGTA AGTCTCTGCT TATTGTCGAT GATTCGGCTT TCAGCCGTGT AGCGCTTAAA
ACGGTTCTTG AAAAGCAAGG GATGCTTGTC GATGAAGCGT TTGACGGAAT GGATGCATGC
AAAAGACTTG AAAGCAAGTT ATATGATCTT GTGTTAATGG ATATGAGAAT GCCGCTGCTC
GATGGTGTGG CCGCGACAAA ACGTATTCGT AAGAGCCGGG GCACAAACAT CTCTTCTGTT
CCGATTATAG GTCTCAGTGG TGACTCGGAT GAGGGTTCGA TAGAAGACGC GATGCAGGCT
GGTATGAATG ATTATCTCGT GAAGCCTGTA GATACAAAAG TGCTGCTGAT GAAAATCAGT
CAGCTGGTAC GGTGA
 
Protein sequence
MNRTNRVGHY VKKCFYEGTQ ISRFNIIIAA VLGAPAHFLF YFVFKYVFHL PYESFALRMI 
ATCFSLSVLL GLDLSEGLVR YFRVYWHVVI IFTLPFIFTV YLLKNDFHEL WLYWEIFMIF
VLITYVPNWL MFLFDLLVGV ICGIAFFVLT TPDIRLNPDF DISLYSIVIF FTVVAGYVFS
YSNKRGQIAL EKNSALQALS GSIAHEMRNP LGQVRYNLEA IEQSLPAYRP GSLSIPINDD
TLDKLYKNVA KSKVAVKRGS QVITMILDQV REKPIDKSGF AYASAAIVTQ KAIDEYGFES
RQEREKVLFS RDENFVFRVD ETIYVFVLFN LIMNALHYLK SCPDARIYIS LEKGVQWNRV
KVKDTGPGIP SENLPRLFDA YFTSGRKGGT GLGLAYCKRV MESFKGDITC DSVEGEYTEF
ILTFPVISGD DIRSNREELI ASNKALFEEK RILVVDDEPA DRTVVREILA DLDAIVEEAG
NGREGLEKLS AHRFDFVIMN LEMPVMNGYE AVENIRNGKA GSENILVPIV AYSAGSYYIV
RGKTKKAGMQ GLISKPCVET ELLRQLAAIF HDCQKHFLQD FTGKSLLIVD DSAFSRVALK
TVLEKQGMLV DEAFDGMDAC KRLESKLYDL VLMDMRMPLL DGVAATKRIR KSRGTNISSV
PIIGLSGDSD EGSIEDAMQA GMNDYLVKPV DTKVLLMKIS QLVR