| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0897 |
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| Symbol | |
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| ID | 6374564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 970970 |
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| End bp | 972607 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683399 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001959323 |
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| Protein GI | 189499853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT TTTCCTCTCT CTCTCTTATT CTCATCCTCC TGTTCTCTGC AGGAATATGC
CGCGCTGTTG AAGACACAAC AACGCAAATA ACAGACACGA CCGTTACCGA AGAATCCGGT
TTTGTTGAGG ATTCTTTAAC AGCAATTCTG CCGGAGCCTC TGCCCATAGA CGACATCGAG
GTCATCAATG CTTTTTCCGA TTCCCTGGGC CAGGAGAGCG GATTTCCGGT AATCCTCAAC
AATAATGAGA TATTTCGTCT CTACGGAACA ATTGAAAATA TCGGCCCGGA GGAACGGGCA
GAGAAAACCA CACAACTTCT GTCGGATTTT TTCCGTTCGT CAGAACCGGC TGATTCCCTG
AGAATCGTAG AGGGAAAACG GCTTACGGGA ATCAGTACAT CACGAAATAT CATCGCCGCA
TTCAGCGATG AAGATGCTGT CGCTGAGGAT ATGTCCAGAC AGGAGTTAGC CTACACGGTA
CTCTCCAGAA TAGCGACTCA GGCACAACAG TTCAGGGATG AAACCAGCGG AACGAATGTT
TTGTTCAGCG TACTCAAATC CCTGCTGTTT TTCGTCGCTC TGGGGATCGT ATGGCACTAC
CTGAACCGTT TATTTTCCTT CATAGACGTC TGGATACAGA AAATACGACT GCGTGGCAAT
TCAAACAGCG AGAACAAAGT ACTACAACTT CTCTCTCCTG ACCATCTGGC ATCAGGCTTT
GGATGGCTCA GCCGGGTAAC AGAACTGTTT TTGAAAATTC TCCTGATCTA CGCATTTCTC
GCTACGGTGC TGAGTTTTTT CCCATGGACA GCGGATCTGT CGACAAATCT GCTCGCATTT
GTTCTCGAAC CGGCAAAAAA AATCTCAGGT GATTTTGTCG CCCTTATCCC CAATATCATC
TCGATTGTCG TCCTGATAGC TATTACCCGC TACCTCGCGA AATTCAGCGA TCTCGTCTTC
AGAAACATCG GAAAAGGAGA GCTTAAGCTC GGTGATTTTG AGGCTGAATG GGCTGAACCG
ACAAGAAAAA TCGTCAAAAT AATCCTCTAC CTTCTCCTGG CGTTCCTCCT TTTCGCGTCG
TTGCCGCTTG CAAACAACCG GACAGCGCTG GCGCTGGCAA TTATTCTGGG ACTAACCCTC
TCTCTCAGTG CCGTACCGGC TGTCCAGAAT ATAATCAGCG GCATCATGCT CAACTATACC
GGATCGTTCA GAATAGGCGA CAGAGTGAAA CTCGGTGACA TCACCGGAGA TATCGTCTAT
AAAAGCCCGC TGGTAATCAG GATAAAAAAC AGGCTGAATG AAATCATCAT CATTCCGAAC
ACGACTGCTT TTCGTTCAAA AATCATAAAT TATACTGAGT CAGTACAAAA AAACGGGCAT
CTTTCGCTCG AACTTGCTTT TCACCTTAAG CAGGACATAA ACACGGAAAC ACTTCGAGAG
CTGGTTCTCG AAGCAGCTCT GAGCACAGAC GGCATCCTGC TCGACCCGAA ACCTGTCTTC
TTGAGGGCTG AATCAAAAAA CGAATTGTTC AGCTACCTGC TGAAAGTCAA TACCAAAGAG
TACAGAAATC TGGAACCTCT CTATTCGAGA CTTTTCCAGA ACGTCCAGAA CAAGTTGCGG
GAAAACAAAT ACACCTGA
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| Protein sequence | MKTFSSLSLI LILLFSAGIC RAVEDTTTQI TDTTVTEESG FVEDSLTAIL PEPLPIDDIE
VINAFSDSLG QESGFPVILN NNEIFRLYGT IENIGPEERA EKTTQLLSDF FRSSEPADSL
RIVEGKRLTG ISTSRNIIAA FSDEDAVAED MSRQELAYTV LSRIATQAQQ FRDETSGTNV
LFSVLKSLLF FVALGIVWHY LNRLFSFIDV WIQKIRLRGN SNSENKVLQL LSPDHLASGF
GWLSRVTELF LKILLIYAFL ATVLSFFPWT ADLSTNLLAF VLEPAKKISG DFVALIPNII
SIVVLIAITR YLAKFSDLVF RNIGKGELKL GDFEAEWAEP TRKIVKIILY LLLAFLLFAS
LPLANNRTAL ALAIILGLTL SLSAVPAVQN IISGIMLNYT GSFRIGDRVK LGDITGDIVY
KSPLVIRIKN RLNEIIIIPN TTAFRSKIIN YTESVQKNGH LSLELAFHLK QDINTETLRE
LVLEAALSTD GILLDPKPVF LRAESKNELF SYLLKVNTKE YRNLEPLYSR LFQNVQNKLR
ENKYT
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