Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0860 |
Symbol | |
ID | 6374527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 927045 |
End bp | 927731 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683368 |
Product | ABC transporter-related protein |
Protein accession | YP_001959292 |
Protein GI | 189499822 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0674344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAG CACGCTCTCT CTTCAAATCA TTCACTCTTC CCGGCCGGAA AAGCCTGGAC ATTCTCCGGG GGATCGATCT CACGGTCGAC GACGGTGAAA TGGTAACCGT GGTTGGAGCT TCTGGAAGCG GCAAAACAAC CTTGCTGAAC ATACTCGGAA CACTCGATAC TCCGGACAAC GGCGAAATAT CCTTCAACGG AGAACAGCTT TTCCGCGACA AACGCTATAC TCTCTCACCA AAAGCTCTCG CAGCATTCAG AAACAGAAAA ATCGGCTTTG TCTTTCAGTT TCATCATCTG CTTTCCGATT TCTCCGCTGT TGAAAACGTC GCCATGTCCG AGTTCATCGC GACAGGAAAA CTGAATCCGG CCAAAGAAAA AGCTTCGCAG CTACTGGAGA AACTCGGGCT TGGAAACAGG CTGGATCATC TCCCCGCCGA ACTCTCAGGT GGCGAACAGC AGCGAGTGGC AATAGCACGT GCCCTGATGA ATTCACCCAT GTTGATTCTT GCTGACGAAC CGAGTGGCAA TCTTGACAGC AGAAACAGCG CGATACTCTA TGATCTTATG GCCGGCCTCA GCAAGGAGCA CCAGACCTCT TTTGTTATCG TGACCCATAA TGAAGACTAT GCCGCAACGG CGGACCGGTG CCTGCGTATG GAAGATGGAG TAATGCATCC CAATTAA
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Protein sequence | MLEARSLFKS FTLPGRKSLD ILRGIDLTVD DGEMVTVVGA SGSGKTTLLN ILGTLDTPDN GEISFNGEQL FRDKRYTLSP KALAAFRNRK IGFVFQFHHL LSDFSAVENV AMSEFIATGK LNPAKEKASQ LLEKLGLGNR LDHLPAELSG GEQQRVAIAR ALMNSPMLIL ADEPSGNLDS RNSAILYDLM AGLSKEHQTS FVIVTHNEDY AATADRCLRM EDGVMHPN
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