Gene Cphamn1_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0709 
Symbol 
ID6374374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp748484 
End bp750628 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content48% 
IMG OID642683221 
Productprotein of unknown function DUF87 
Protein accessionYP_001959147 
Protein GI189499677 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.74185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC CGATTTCCAA AATTTCATCC TTGACAATCG GAACGGTGGA GAGTGTTGCT 
CCCGATGAAA TCAAGGTGTT GCTGGACATT GATTCTTCCA GAAATACTGC TCTCAACACA
GGTGTCCCGA CCCCATTTCC GAGAATAAAT AGCTTCGTTC TTCTGCCCAA CGAATCTGGA
GCTGTAGTTG GAATCGTCGT ATGGCTGGGG GTGGAAAGAT CGGCCTATCC CAAACGACAA
GGACTAAAGG ATTTCGGCCT GATTGACTTG CCATTTCCTC TGCGGAAAAT GGCAATCTGT
CCGATTGGAA CTCTTCTTTC TGAAAAGAAT AAATGGCGGC TTGAAAGGGG GGTTCAGAGT
TTCCCATCAG TTGGCGATCC AGTAATTCTT CCAACAAGGG ATCAAACCAT CGCCATAGTT
ACTGGCCAAG GAAAGGACAG CCGAGTTCCG TTGGGCACCT GCCCTATCGC ACATGATGCG
CCAATCGCGG TCGATCCAGA CAAACTGTTT GGCCGTCATC TTGCCGTCTT GGGAAATACT
GGAAGCGGCA AGTCTTGTAC ATTGGCTGCG TTGGTGCGTT CTGCCGTTGA ATCAGCTCAA
AAAGCTATTA CAAGAACCGA GTTTTCGGAG GTAGCGAAAG AAGCTCAAAA CAGCCAAGAC
AATCCAAACG CACGTTTCAT AATCCTTGAT CCTAATGGCG AATATTCGAA ATGTTTCAAG
GATTTAGTGG GAGGGTGCAG GATATTTCAG GTTCCACCAC TTACCAACCC TGATGCCGCT
GAATTCACTT TGCCTGCTTG GATGTGGAAT AGCTCGGAGT GGGCAGCGGT TGCTCAAGCA
GCACCAAAAG TTCAGAAACC TATTCTGCAG ACAGCTTTGC GGGATCTAAG GTCTGGAAGC
TGCGGCTCCC TGGATTTAAA GACCAAAATC TGGGGGCGGT GTCGCATGGT GTTTGTGTAT
TTATCGCAGT TCGAGGGAAA AGGAACTATC GGATGGCCAC ATACAGATAA CTGCGGCTCT
CAGCTATTCG CATTTTGCGA TGACATTAGA AGCCACAAAA CAAAGCTTGA TGCGGGCGAT
CCTTTATTCC AGCCACTTGT AGACTTGGAA ACTCAGCTCA ATCAGACATT AACGACGAAC
CAAAAGAAGA ACCGAACATA TCATGATTTT TCAGACGAAT CTTTGTCGGC TATTGTAAAT
CTAATCAACG GGGTTCTTGC GCAATATCCA GCAGAGATGC ACCAGGTTTG TTCGAATGAA
GATTCTCCGG TCAATTTTGA CATAAACAGC CTTGCTGACT ACTTGGAGAT TGTAGCAAAC
CAGCAAGGAG GCAATTCGAA TCAATTCATC GCGACGATGA TCATGAGAAT CAAAGCGATG
CTTGGTGACA CCAGAATGAA GGATGTTATC ACACCGGACA ACATGCCGAC TCTTTCGGAT
TGGCTTAGTG GTCATGTCGG CTCAAACGGC GGGGAAAATG GTCCTGTAGC AGTAATCGAC
TTATCCCTCG TTCCTTATGA GATTCTCCAT CTCGTCATAG CGGTTTCCTC CCGGCTGATA
CTGGAATCAC TGCAGCGCTA CCGTAATCTC AACCGCCAGA ACTTACCCAC CGTACTCGTC
TTGGAAGAAG CACACACATT CGTGGCAAAG CGGCTGCCTC ATGGCGACGA AATTCCAAGT
CCCGCCGATA TGTGTCGAGG GATTTTTGAG CGAGTCGCCA GAGAGGGCCG CAAATTCGGA
TTGGGGCTTG TGCTGTCATC TCAGAGACCT TCTGAACTAT CGGAAACGGT GTTGTCTCAG
TGTAATTCCT TTCTCCTGCA TCGAATCACG AATGATCGGG ATCAAGAGCT TATCTCCCGT
TTGGTTCCTG ATAATGCTCG TGGGTTGCTT CGGGAATTAC CAAGTCTGCC AACTCGCCAT
TGTATTCTGT TAGGTATTGC TTCAAAGGTG CCCGCGCTCG TAGAAGTCCA ACATTTAGAG
GACGAACATA GACCATCATC TGATGATCCT GATTTCTGGG ATGTGTGGAC TAAGGAAAAA
CCTCGTTCAA TCGATTGGGA TAAAATCACC AGAGATTGGA TCGGAGCGGG AGCTGATGAT
GATGTTTTGA AGGAAGATGG GGATGACGAA TGCGACGTTC AGTAA
 
Protein sequence
MSSPISKISS LTIGTVESVA PDEIKVLLDI DSSRNTALNT GVPTPFPRIN SFVLLPNESG 
AVVGIVVWLG VERSAYPKRQ GLKDFGLIDL PFPLRKMAIC PIGTLLSEKN KWRLERGVQS
FPSVGDPVIL PTRDQTIAIV TGQGKDSRVP LGTCPIAHDA PIAVDPDKLF GRHLAVLGNT
GSGKSCTLAA LVRSAVESAQ KAITRTEFSE VAKEAQNSQD NPNARFIILD PNGEYSKCFK
DLVGGCRIFQ VPPLTNPDAA EFTLPAWMWN SSEWAAVAQA APKVQKPILQ TALRDLRSGS
CGSLDLKTKI WGRCRMVFVY LSQFEGKGTI GWPHTDNCGS QLFAFCDDIR SHKTKLDAGD
PLFQPLVDLE TQLNQTLTTN QKKNRTYHDF SDESLSAIVN LINGVLAQYP AEMHQVCSNE
DSPVNFDINS LADYLEIVAN QQGGNSNQFI ATMIMRIKAM LGDTRMKDVI TPDNMPTLSD
WLSGHVGSNG GENGPVAVID LSLVPYEILH LVIAVSSRLI LESLQRYRNL NRQNLPTVLV
LEEAHTFVAK RLPHGDEIPS PADMCRGIFE RVAREGRKFG LGLVLSSQRP SELSETVLSQ
CNSFLLHRIT NDRDQELISR LVPDNARGLL RELPSLPTRH CILLGIASKV PALVEVQHLE
DEHRPSSDDP DFWDVWTKEK PRSIDWDKIT RDWIGAGADD DVLKEDGDDE CDVQ