Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0709 |
Symbol | |
ID | 6374374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 748484 |
End bp | 750628 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683221 |
Product | protein of unknown function DUF87 |
Protein accession | YP_001959147 |
Protein GI | 189499677 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.74185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAC CGATTTCCAA AATTTCATCC TTGACAATCG GAACGGTGGA GAGTGTTGCT CCCGATGAAA TCAAGGTGTT GCTGGACATT GATTCTTCCA GAAATACTGC TCTCAACACA GGTGTCCCGA CCCCATTTCC GAGAATAAAT AGCTTCGTTC TTCTGCCCAA CGAATCTGGA GCTGTAGTTG GAATCGTCGT ATGGCTGGGG GTGGAAAGAT CGGCCTATCC CAAACGACAA GGACTAAAGG ATTTCGGCCT GATTGACTTG CCATTTCCTC TGCGGAAAAT GGCAATCTGT CCGATTGGAA CTCTTCTTTC TGAAAAGAAT AAATGGCGGC TTGAAAGGGG GGTTCAGAGT TTCCCATCAG TTGGCGATCC AGTAATTCTT CCAACAAGGG ATCAAACCAT CGCCATAGTT ACTGGCCAAG GAAAGGACAG CCGAGTTCCG TTGGGCACCT GCCCTATCGC ACATGATGCG CCAATCGCGG TCGATCCAGA CAAACTGTTT GGCCGTCATC TTGCCGTCTT GGGAAATACT GGAAGCGGCA AGTCTTGTAC ATTGGCTGCG TTGGTGCGTT CTGCCGTTGA ATCAGCTCAA AAAGCTATTA CAAGAACCGA GTTTTCGGAG GTAGCGAAAG AAGCTCAAAA CAGCCAAGAC AATCCAAACG CACGTTTCAT AATCCTTGAT CCTAATGGCG AATATTCGAA ATGTTTCAAG GATTTAGTGG GAGGGTGCAG GATATTTCAG GTTCCACCAC TTACCAACCC TGATGCCGCT GAATTCACTT TGCCTGCTTG GATGTGGAAT AGCTCGGAGT GGGCAGCGGT TGCTCAAGCA GCACCAAAAG TTCAGAAACC TATTCTGCAG ACAGCTTTGC GGGATCTAAG GTCTGGAAGC TGCGGCTCCC TGGATTTAAA GACCAAAATC TGGGGGCGGT GTCGCATGGT GTTTGTGTAT TTATCGCAGT TCGAGGGAAA AGGAACTATC GGATGGCCAC ATACAGATAA CTGCGGCTCT CAGCTATTCG CATTTTGCGA TGACATTAGA AGCCACAAAA CAAAGCTTGA TGCGGGCGAT CCTTTATTCC AGCCACTTGT AGACTTGGAA ACTCAGCTCA ATCAGACATT AACGACGAAC CAAAAGAAGA ACCGAACATA TCATGATTTT TCAGACGAAT CTTTGTCGGC TATTGTAAAT CTAATCAACG GGGTTCTTGC GCAATATCCA GCAGAGATGC ACCAGGTTTG TTCGAATGAA GATTCTCCGG TCAATTTTGA CATAAACAGC CTTGCTGACT ACTTGGAGAT TGTAGCAAAC CAGCAAGGAG GCAATTCGAA TCAATTCATC GCGACGATGA TCATGAGAAT CAAAGCGATG CTTGGTGACA CCAGAATGAA GGATGTTATC ACACCGGACA ACATGCCGAC TCTTTCGGAT TGGCTTAGTG GTCATGTCGG CTCAAACGGC GGGGAAAATG GTCCTGTAGC AGTAATCGAC TTATCCCTCG TTCCTTATGA GATTCTCCAT CTCGTCATAG CGGTTTCCTC CCGGCTGATA CTGGAATCAC TGCAGCGCTA CCGTAATCTC AACCGCCAGA ACTTACCCAC CGTACTCGTC TTGGAAGAAG CACACACATT CGTGGCAAAG CGGCTGCCTC ATGGCGACGA AATTCCAAGT CCCGCCGATA TGTGTCGAGG GATTTTTGAG CGAGTCGCCA GAGAGGGCCG CAAATTCGGA TTGGGGCTTG TGCTGTCATC TCAGAGACCT TCTGAACTAT CGGAAACGGT GTTGTCTCAG TGTAATTCCT TTCTCCTGCA TCGAATCACG AATGATCGGG ATCAAGAGCT TATCTCCCGT TTGGTTCCTG ATAATGCTCG TGGGTTGCTT CGGGAATTAC CAAGTCTGCC AACTCGCCAT TGTATTCTGT TAGGTATTGC TTCAAAGGTG CCCGCGCTCG TAGAAGTCCA ACATTTAGAG GACGAACATA GACCATCATC TGATGATCCT GATTTCTGGG ATGTGTGGAC TAAGGAAAAA CCTCGTTCAA TCGATTGGGA TAAAATCACC AGAGATTGGA TCGGAGCGGG AGCTGATGAT GATGTTTTGA AGGAAGATGG GGATGACGAA TGCGACGTTC AGTAA
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Protein sequence | MSSPISKISS LTIGTVESVA PDEIKVLLDI DSSRNTALNT GVPTPFPRIN SFVLLPNESG AVVGIVVWLG VERSAYPKRQ GLKDFGLIDL PFPLRKMAIC PIGTLLSEKN KWRLERGVQS FPSVGDPVIL PTRDQTIAIV TGQGKDSRVP LGTCPIAHDA PIAVDPDKLF GRHLAVLGNT GSGKSCTLAA LVRSAVESAQ KAITRTEFSE VAKEAQNSQD NPNARFIILD PNGEYSKCFK DLVGGCRIFQ VPPLTNPDAA EFTLPAWMWN SSEWAAVAQA APKVQKPILQ TALRDLRSGS CGSLDLKTKI WGRCRMVFVY LSQFEGKGTI GWPHTDNCGS QLFAFCDDIR SHKTKLDAGD PLFQPLVDLE TQLNQTLTTN QKKNRTYHDF SDESLSAIVN LINGVLAQYP AEMHQVCSNE DSPVNFDINS LADYLEIVAN QQGGNSNQFI ATMIMRIKAM LGDTRMKDVI TPDNMPTLSD WLSGHVGSNG GENGPVAVID LSLVPYEILH LVIAVSSRLI LESLQRYRNL NRQNLPTVLV LEEAHTFVAK RLPHGDEIPS PADMCRGIFE RVAREGRKFG LGLVLSSQRP SELSETVLSQ CNSFLLHRIT NDRDQELISR LVPDNARGLL RELPSLPTRH CILLGIASKV PALVEVQHLE DEHRPSSDDP DFWDVWTKEK PRSIDWDKIT RDWIGAGADD DVLKEDGDDE CDVQ
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