| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0675 |
|---|
| Symbol | clpX |
|---|
| ID | 6374339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 710986 |
|---|
| End bp | 712299 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642683187 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_001959114 |
|---|
| Protein GI | 189499644 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAG GAAAAGAGAA GATGAAAGGT AAAGGTAAAG ATGGCGGCGG CAATGAGGTC
GTATTGTGTT CTTTCTGCGG AAGGGGCAGT GACGAGGTGA GCAGTATGGT CGCAGGCCCG
AAAGCGTTTA TCTGTGACAG GTGTATCATG AGCTCCGTTG AAATTCTCCG CAAGGAGATC
AGCGCCATTA AGCCAACCGC TCAAGCGGTC AGTCAGCCGT TTCAGCCACG CCTTCTGAAC
CCGAAAAGCA TTATGGAGTC GCTTGGCCAA TATGTGATCG GTCAGGAACG TGCCAGGAAA
TCATTGTCCG TAGCTGTCTA TAACCACTAT AAACGTATCG AGTCACAGGA ATGGGTGAGG
GATGACGATG ATGTGGTCAT CGAGAAGAGC AATATTCTGC TTATTGGCCC TACCGGAACG
GGTAAAACCC TTCTTGCGCA GACGCTGGCC AACCTTCTTG AAGTTCCCTT TACCATTGTT
GACGCCACCT CTCTCACGGA GGCAGGATAT GTCGGCGACG ATGTCGAAAC GATTCTCGCA
CGTCTGCTTC AGGCGTCCGA TTTCAATCTC GAAAGAGCCG AGAAAGGGAT TATCTATGTC
GACGAGATCG ACAAGATCGC CCGCAAGTCG GCCAATGTTT CCATTACTCG CGATGTTTCA
GGGGAAGGCG TGCAGCAGGC GCTTCTGAAG ATACTCGAGG GAGCGGTTGT CGGCGTTCCG
CCAAGGGGCG GCAGGAAACA CCCTGAGCAG CAGCTGATCA ATGTCAATAC CAGGAACATT
CTTTTCATCT GCGGAGGAGC CTTTGAAGGC CTCGACAAGA TTATCGGTCG AAGGGTAGCA
AAAGCTTCCA TCGGTTTCGG GACAGCGGTC AAAGCGCAGC AGCTTGAATC AGATCCTGAA
ATTCTCAAAG AGGTTTCCCA GGACGATATG CATGAATACG GGCTGATCCC TGAATTTATC
GGTCGTCTCC CGGTCATTTC CACACTCGAC CCGCTCGACA GCAAAGCCCT GCGCAACATT
CTTGTCGAAC CGAAGAACGC GCTTATCAAG CAGTATCAGA AACTGTTCGA AATGGAGGAG
TGCGAACTGG TTTTTGAGGA CAAGGCGCTT GACAGCGTTG TAGAAATCGC CATAGACCGC
GGAACCGGCG CCCGGGCTCT GCGTTCCGTA CTCGAAGGCA TCATGATCGA CATCATGTTC
GAACTGCCCT CGATGAGCGG TGTACGCAAA TGCGTCATCA CCGAAGCGGT GATTGCCGGC
GAGGGAGAAC CTGAATTCTA TTACGAAGAC GGCAAAAAGA AAAAAACAGC CTGA
|
|---|
| Protein sequence | MSTGKEKMKG KGKDGGGNEV VLCSFCGRGS DEVSSMVAGP KAFICDRCIM SSVEILRKEI
SAIKPTAQAV SQPFQPRLLN PKSIMESLGQ YVIGQERARK SLSVAVYNHY KRIESQEWVR
DDDDVVIEKS NILLIGPTGT GKTLLAQTLA NLLEVPFTIV DATSLTEAGY VGDDVETILA
RLLQASDFNL ERAEKGIIYV DEIDKIARKS ANVSITRDVS GEGVQQALLK ILEGAVVGVP
PRGGRKHPEQ QLINVNTRNI LFICGGAFEG LDKIIGRRVA KASIGFGTAV KAQQLESDPE
ILKEVSQDDM HEYGLIPEFI GRLPVISTLD PLDSKALRNI LVEPKNALIK QYQKLFEMEE
CELVFEDKAL DSVVEIAIDR GTGARALRSV LEGIMIDIMF ELPSMSGVRK CVITEAVIAG
EGEPEFYYED GKKKKTA
|
|---|
| |