Gene Cphamn1_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0411 
Symbol 
ID6374073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp434199 
End bp434951 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID642682928 
ProductNucleotidyl transferase 
Protein accessionYP_001958857 
Protein GI189499387 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.629594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAG CAATTATTAT CATGGCCGCC GGCAAGGGAA CCAGAATGAA GTCAGATCTT 
GCCAAAGTAC TGCACAAGGC GAACGGGCGC CCTGTTATAG AGTATGTCCT TGATAAAACA
ACTGCTCTCG ATCCGGATAA AACAGTTTTG ATTGTCGGAC ACCAGGCCGA TAAAGTCAGA
AAGGCAACGA GCCATTTCCC TGTTGTGTGG GCTCTACAGG AACCTCAGCT TGGCACAGGC
CATGCGATTA TGCAGGCAGA GGAGCCATTG AGTTTTTTTA AAGGCGATAT ACTTATCCTT
TCCGGAGACG CCCCGCTGGT CACGCTTTCA ACCCTCAGAA AACTGATTGA AAGTCATCGG
AATCAAAGCG CAGCTGCAAC AGTTCTGACG GCAGACCTTA CTGACCCATC CGGATACGGT
AGAATTATAC GTAACGGAAA CACCAGCGAT GTTTCGAGAA TAGTCGAGCA TAAAGATGCT
TCTCCTGAAG AACGCCTGAT ACATGAGATC AATTCAGGCG TCTATGTGTT CAGATCGGAC
ACTCTTTTCC ACTCCCTGAG TAAAATCTCA GACAAAAACG CGCAGCAGGA GTACTACCTT
ACCGACGTCT TTTCCATATG CTTTGAAAAC GGGGAAAAGG TAAGCGCATG CAAAACAGAA
AATGCCGACG AAATCAAAGG AATAAATACG GTGGAACAAC TCAGGGAAGC GGAACGGGTA
CTTCTGAAAA ACTCTACAGA CAGCCGCTCT TAA
 
Protein sequence
MSLAIIIMAA GKGTRMKSDL AKVLHKANGR PVIEYVLDKT TALDPDKTVL IVGHQADKVR 
KATSHFPVVW ALQEPQLGTG HAIMQAEEPL SFFKGDILIL SGDAPLVTLS TLRKLIESHR
NQSAAATVLT ADLTDPSGYG RIIRNGNTSD VSRIVEHKDA SPEERLIHEI NSGVYVFRSD
TLFHSLSKIS DKNAQQEYYL TDVFSICFEN GEKVSACKTE NADEIKGINT VEQLREAERV
LLKNSTDSRS