Gene Cphamn1_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0380 
Symbol 
ID6374042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp402174 
End bp403070 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content46% 
IMG OID642682898 
Productglycosyl transferase family 2 
Protein accessionYP_001958827 
Protein GI189499357 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CGGTTGTAAT TCCCGTATAT AATAGCTCGG ACTTTCTTTT CCCTGCGCTG 
GACTCGATAG CAGCATCTTC CGCAAACAGG GAGTATGAAG TAATCGTGGT CGACGACTGT
TCAGATGATA TTGGTAAAAC CAGACAGATC GTTGACTCCT TCAGTGGTGT ATCACTCGTT
CAAAAAGAGA GAAAAACCAA CGCGGCGGAT TCAAGGAATA TCGGTATGGC GCTATCGAAA
GCTGATTATG TGTTTTTTCT TGATTCTGAT GACAGGGTGT TGCCGGGTTA CATTGACAGG
AGGATCCGTA TGCTTCAGGA AACCGGTGCC GGGTTGCTGT TTGGTGATTT CCTTTCAAGC
GCGGGGACGC GGAAGATACG GGCAGGAATT CCTTCATATG CAGGCGGCGA TACGAGAGAC
TATCTTTTTG TCAGCGGAGG CGACTGCAGA TCTTCTACAA TTTCTGTAAA CAGAAAAAAG
CTTGCAGGAT GCACCTTTGA CGGTAGCCTT GAAAAACATC AGGATTGGGG TTTTCTGCTC
AGGGCGTATG ATGCCGGTAC AGTGATTCAT TTCGATCCTG AACCCGGAGT ATTGATGCAG
GTCTACCATG CTGACAGAAT GAGCAGATCC TCTAACGTTG ATGCAAGCCG CTTCTTCATG
CGAAAATACC TGAAAGAAAG GCGGCATATT AACGGCTTTT CGCGTAAGCA CTGGAAATCG
GTTCTGGCCG GCAGGGATCA AGATGCCATC AGGTTCTTTT TCGGGATATA CCGGCCTGAA
AAGATCTTCT TGAAAGATGC GTTCCGTTTC TATCTGTACA GAATTTTAAG TACAGTGCCA
TTGGTTTATC CGGCTTCATG TTTCATTACC TTTTTCAGGA AGATTAAGTG GCAGTGA
 
Protein sequence
MDFSVVIPVY NSSDFLFPAL DSIAASSANR EYEVIVVDDC SDDIGKTRQI VDSFSGVSLV 
QKERKTNAAD SRNIGMALSK ADYVFFLDSD DRVLPGYIDR RIRMLQETGA GLLFGDFLSS
AGTRKIRAGI PSYAGGDTRD YLFVSGGDCR SSTISVNRKK LAGCTFDGSL EKHQDWGFLL
RAYDAGTVIH FDPEPGVLMQ VYHADRMSRS SNVDASRFFM RKYLKERRHI NGFSRKHWKS
VLAGRDQDAI RFFFGIYRPE KIFLKDAFRF YLYRILSTVP LVYPASCFIT FFRKIKWQ