| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0032 |
|---|
| Symbol | |
|---|
| ID | 6373675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 37167 |
|---|
| End bp | 37715 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682554 |
|---|
| Product | Redoxin domain protein |
|---|
| Protein accession | YP_001958502 |
|---|
| Protein GI | 189499032 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000358102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTT TCAAATTATG CACTGTTCTG AGTATCTCTC TGGTCATAAT TGCCTGCAAG
ACAGAGCCGG CTGAAACGGC AAAGCCGCAG GCTGCGACCG TTGAGGAGAC GCAGGTGGTC
ATGGCTCCGG AATTTGCCGG AAAAACTCTG GAAGGGGCGG ATTTTTCTTC ACAGGAACTC
TCAGGAAAGG TCTACATACT TAATTTTTTC GCGTCCTGGT GCCCTCCATG CCGAGCAGAA
GTCCCGGATA TGATTGAGCT TCAGAATGAG TATGAGCAGA AAGGATTTAC CTTTATCGGG
GTGACAGTAG ACGAGGATCT GACGAAGGCA AGGCAGTTTG TCGATGATTT CGGTATCAAC
TTTCCTGTTC TGGTCGCCGA TCAGCAGATG ATCGATGCCT ATAGCGATCA TGTTCAGGGC
GGTTTACGTT CCATCCCGAC ATCTTTTGTT ATCAGCGCAG ATGGTTCGAT ATCTTCTGTG
CTTGTAGGCG CTCAAAGTAA AATGGCTTTT GACGGATTGA TTCGTGAAGT CATTGGCGCG
GGCAAGTAA
|
|---|
| Protein sequence | MRFFKLCTVL SISLVIIACK TEPAETAKPQ AATVEETQVV MAPEFAGKTL EGADFSSQEL
SGKVYILNFF ASWCPPCRAE VPDMIELQNE YEQKGFTFIG VTVDEDLTKA RQFVDDFGIN
FPVLVADQQM IDAYSDHVQG GLRSIPTSFV ISADGSISSV LVGAQSKMAF DGLIREVIGA
GK
|
|---|
| |