Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2521 |
Symbol | |
ID | 4569686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2885754 |
End bp | 2886446 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639767081 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_912933 |
Protein GI | 119358289 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.871653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTCTGG TGTGGATTTT CGCCCTCATT ATTGCTTATC CGTTTATTCC CGGCTCACAG ACTCAGGTGT TTCAGGGTGT CAGCGTGTTT TTGGGGCTTA TGGTTTCTCT GGGTTCGGCC GGACTGGTCG GTCAGCTTAT CGGGGGTCTT GTTGTTGTCT ATACCAGAGC GTTTCAGGCT GGAGATTTTG TCCGTATCGG AGAGCATGAG GGGGTTGTGC AGGAGCTTGG TCTGCTGGCG GCGAAGATTA TTACGATCAG AAAAGAGGAG ATCACGATTC CCAATGCGCT GTTGATGAGC ATTACGACTA TCAATTATAC CCGGCAGTCA AAAAATGAGT ACGGAATCAT GATTGCTACC GGCGTGACCA TCGGGTATGA TGCGCCGTGG CGGCAGGTTC ACGCTATGCT CGAAATGGCT GCTCAAAGAA CCTCGGGCGT TCGTCAATCT CCGGAGCCGT ATGTGTTGCA GAGGGCGCTT GCCGACTTTT ATGTTGAGTA TACGCTCATG GTCGGTCTTG ACAAGGCGGA GGATCGGTAT TTTATCATGT CGGAACTGCA TGGCCACATT CAGGATGTGT TTAACGAGCA TGGCGTTCAG ATCATGTCTC CGCATTTTAT GGCGCAGCCT GACGCCTCCG TTGTGGTTCC GAGGGAGCAG TGGTTTGCTC CCCCGGCAGC ACGGAAGTCG TAG
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Protein sequence | MVLVWIFALI IAYPFIPGSQ TQVFQGVSVF LGLMVSLGSA GLVGQLIGGL VVVYTRAFQA GDFVRIGEHE GVVQELGLLA AKIITIRKEE ITIPNALLMS ITTINYTRQS KNEYGIMIAT GVTIGYDAPW RQVHAMLEMA AQRTSGVRQS PEPYVLQRAL ADFYVEYTLM VGLDKAEDRY FIMSELHGHI QDVFNEHGVQ IMSPHFMAQP DASVVVPREQ WFAPPAARKS
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