| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2350 |
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| Symbol | |
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| ID | 4569608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2732875 |
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| End bp | 2736036 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639766908 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_912762 |
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| Protein GI | 119358118 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG AAGTAAAAAC GAGGGATGAG CTTATTACTG AAATCGAAGA ACTCCGTCGT
CAATGTTCAA GCCTTGAAGA TGCAATCAAC GCTCAACGCG CAGGATGGAG TTCCTGTATG
TACCGAGAGT CGTTTGTTCA GTGCGTTTTT CGAGAGTTGC CAACCGGCAC CGGTTTGATT
GCAGACTCCG TTATCAAAGA TGCCGACAGC GCGCTCTGTT CTCTTCTCGG CTATACGCCG
GATGAGTTGC TCAATCGAAA ATGGAGCATT CTTTATACAA CCGACGCCGA TTATGACTAT
GTGGGTGACG AACTGCATCG TCAGATCAGG GGTTATGGAA CTGGAACGAT TGAAACCGCC
ATGCAGTGCA AGAACGGTTG CATTCGCAAT GTTCTCGTTT CCCTCTATCC GATTAACTCT
GCCGATCTCT TGCTCGGGTT TACCTTAATT GTTCGCGATA TCACTGAGTG GAAAAAGTCT
GAAAAACAGA TTCAGGAAAG CGATAATCGT TACGCAGCAC TCATTGAAAA TATAGACACC
GGTGTTGCTG TATATGATGC AGTTGATGAT GGTAGGGATT TTATTCTCAA GGCGCTCAAT
CCCGCAGCGG AAAGAATAGT ACATCTTACA GGGGCGCAAG TTGTAGGCAA AACGCTGTTG
ACTCTTTTTC CCAATATGGG TTCAACCGTT TTGCCCGCTG CTCTCTGCCG GGTTTGGAAA
ACAGGTCGAA CCGAACACCT TGCTCCGTTT TATTATCAGG ACGATATTCG GCAGGGCTGG
AGGGAAAACC ATATATATAA AATTCCCTCA GGGGAGATTG TTGCGCTTTT TGATGACGTT
ACCGAACGCA AACAGATTGA AGACTCTCTG CGGGAGAGTG AAGAGCGTTT CAGGGTTTTA
TTTGAAAATA TCAGAGACGG AGTCTTCGTT CACCCGATGA TCACTCCTTC CGAGCCAGGA
AAGTTTGCTA TGGTTAATCC CTCGGCATGC GATATTCTTG GCTATACCCA AGAGGAGCTG
CTTGGCATGG GTCCAAGAGA ACTTGATGAT GCTGAAAGTT CGGTAACCTA CATTCCCGAG
GCGATGAAGC GCCTGATGGA GGATGGATGT GTTCTGTTCG AAGCGGTACA GCGTGACAGA
AAAGGGAACA GGATACCTGT AGAGGTTAAT GCGAACATCG TGGAACTTTC AGGCAGACCC
TATATTGTGT CGAGTGTTCG AGATATTACT TTGCGCAAAC AGCACGAGAA TAAGTTACTT
GAAAGCACGC AGTTTCTTAA GAGTATTTAT GATGGAGTAA ACAATTCCGT TTTTGTGGTT
GATGTCCAGC AGGATGGTTC CTATCGTTAT AAGGGAATTA ATCGAATGCA TGAAATACTG
ACGGGCATCA AGAACGAAGA GATAACAGGA AAATCTCCCG ACGAGATCAT CGATGCGCCT
TTTGCAGAAT CCGTTATCCG TCGTTATGAT GCCTGTATTC AAAGCGGCAG CACGATTCAG
TACGAAGAGC TGCTGCCGTT CAAAGGCAGA GAGACCTATT GGGAAACCGT TCTGACACCG
GTTCGCGATA ATGTCGGTCA TATCTACAGA ATTATCGGAA CCAGTACGGA TATTACCAAG
CGCAAGATCT CCGAACAGAG GCTGAGAAAA CTGAGCGTTG CCGTAGAACA GAGCCCCGCT
GTTGTCGTTA TAACCGATTA TATGGGAAAT ATTGAGTATG TGAATCCAAA ATTCACACAG
CTCACAGGGT ATACCGTTCG GGAGGCGGTA GGAAATAATC CTAACATCCT TCAGTCCGGT
TTGACGCCAA GGGAGACTTT TTATGAGCTT TGGGATACGA TTCTTTCCGG AGGAGTGTGG
CATGGAGAGT TTTACAACAG AAAGAAAAAC GGAGATATCT ATATCGAGTC GGCGGTTATC
TCCCCTATTT TCAATAAGGA GGGGTCGATC ACCAATTTTG TGGCCGTAAA GGAGGATATT
ACCGAAAAGA AAAAACTGTG GAGCGAATTG ATTGCCGCAA AGGAGAAAGC CGAAGAGAGC
GACCGGTTGA AAACAGCTTT TCTTGCCAAT ATCAGCCATG AGATACGAAC GCCGATGAAT
GGTATTCTCG GTTTTTCAGA GCTATTGAAG GAACCGCATC TCTCCGGAGA GGAGCAGACC
GAATATATCA ATCTCATTAA CCAAAGCGGT CAGCGGATGC TTCATCTCAT CAATGAGCTT
GTTGATATTT CACGCATTGA ATCCGGAGAT ACATTTCTCC AGATCACCGA AACGTCGATT
AACAGGTTGA TGCATGATAT TTATGCGTTT TTCAGGCCCG AAGCAGCGAA AAAAGGGTTG
CTTTTCGAAT GCATCGTCGG TCTTTCGGAT CTCTTCAGCG TTATTGATAC TGATAGCTCA
AAAGTAAACC AGATTTTGAC AAACCTTGTT CAGAATGCGC TGAAATTCAC AACTGAAGGG
AGCGTTGATT TTCGTTATAC GTTGAAAAAC GATTGCCTTG AGTTTTATGT TACTGATTCA
GGCGCCTGTA TTCCTTCTGA AATGAAAGAG AAGATTTTCG ACCGGTTCAG GCAGGTTGAC
AACTCGCTGA CCCGGCGTTA CGAAGGAGCT GGTCTCGGCT TGAGCATTTC GAAGGCATAC
ATTGAAATGC TTGGCGGTAA AATTTGGGTT GAATCGATAG AGGGCAGGGG GAACAGATTT
GTCTTTACGT TACCATATAA ACCATCCACT TCCGTGACTA TGCAGCAGTT CGATCCGGAT
TTTCAGGGGC GAACGGAATG TTTTTCAAAC CTGACTATTC TTATTGCAGA AGATGACGAG
GTCAGCAGTC TCTTATTGCA GCGGAATCTC AAAGGTGAGA ATATCACTAT TCTTCATGCC
CGAAACGGTC AGGATGCGGT CGAACAGGTT CAGAAGAATT CGGCGATTCG ACTGGTCTTG
ATGGACATAC AGATGCCGGT GATGAACGGT TTTGATGCGA CCCGGGAGAT CAAGGCGCTC
AGACCCGGGC TGCCGGTTAT CGCTCAGACA GCGTTTACAT CAAAAGAAGA AAAGGAAAAA
ACAAAAGAGG CCGGATGTGA CGGTTTTATT ACCAAACCTG TCAATAAAAT CGAGCTGCTC
TGTCTTATGG AGTCGTTGCT GAACCCGAAA ACCGGGGATT GA
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| Protein sequence | MTDEVKTRDE LITEIEELRR QCSSLEDAIN AQRAGWSSCM YRESFVQCVF RELPTGTGLI
ADSVIKDADS ALCSLLGYTP DELLNRKWSI LYTTDADYDY VGDELHRQIR GYGTGTIETA
MQCKNGCIRN VLVSLYPINS ADLLLGFTLI VRDITEWKKS EKQIQESDNR YAALIENIDT
GVAVYDAVDD GRDFILKALN PAAERIVHLT GAQVVGKTLL TLFPNMGSTV LPAALCRVWK
TGRTEHLAPF YYQDDIRQGW RENHIYKIPS GEIVALFDDV TERKQIEDSL RESEERFRVL
FENIRDGVFV HPMITPSEPG KFAMVNPSAC DILGYTQEEL LGMGPRELDD AESSVTYIPE
AMKRLMEDGC VLFEAVQRDR KGNRIPVEVN ANIVELSGRP YIVSSVRDIT LRKQHENKLL
ESTQFLKSIY DGVNNSVFVV DVQQDGSYRY KGINRMHEIL TGIKNEEITG KSPDEIIDAP
FAESVIRRYD ACIQSGSTIQ YEELLPFKGR ETYWETVLTP VRDNVGHIYR IIGTSTDITK
RKISEQRLRK LSVAVEQSPA VVVITDYMGN IEYVNPKFTQ LTGYTVREAV GNNPNILQSG
LTPRETFYEL WDTILSGGVW HGEFYNRKKN GDIYIESAVI SPIFNKEGSI TNFVAVKEDI
TEKKKLWSEL IAAKEKAEES DRLKTAFLAN ISHEIRTPMN GILGFSELLK EPHLSGEEQT
EYINLINQSG QRMLHLINEL VDISRIESGD TFLQITETSI NRLMHDIYAF FRPEAAKKGL
LFECIVGLSD LFSVIDTDSS KVNQILTNLV QNALKFTTEG SVDFRYTLKN DCLEFYVTDS
GACIPSEMKE KIFDRFRQVD NSLTRRYEGA GLGLSISKAY IEMLGGKIWV ESIEGRGNRF
VFTLPYKPST SVTMQQFDPD FQGRTECFSN LTILIAEDDE VSSLLLQRNL KGENITILHA
RNGQDAVEQV QKNSAIRLVL MDIQMPVMNG FDATREIKAL RPGLPVIAQT AFTSKEEKEK
TKEAGCDGFI TKPVNKIELL CLMESLLNPK TGD
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