Gene Cpha266_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2163 
Symbol 
ID4570764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2504876 
End bp2505682 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content52% 
IMG OID639766738 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_912592 
Protein GI119357948 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0955758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGA GTGATCTTAA TCCGTTAAGC AAGGTGAAGC TGCGCAGGTT TGTTAAGCTT 
CAGGAAAAAA AGTATCGGGA CCAGGATGGG CTGTTTCTTG CTGAAGGTCT TCGTACCGTC
AGGGAGCTCT GCCAGAACAT TCCCGACGAG AGCATGCTTC TTGCTCTCTT GCTTCGGGAA
GGGGAGATCG GGCTTGGCGG ATTTCCTGAG ATTCCGGAAG ATAAGCTGTA TGTGATGAAC
AGTGAGCAAT GTTCTCTGCT TAGCAGTACC GCTGCGCCAC AGGGCGTTAT CGGGGTTTTT
CGTCAGCAGC AGGTGAGTCG GTACCCATGC GGTTTTAAAG ACGAAAAGAA AGGGCGCTCT
TTGCTTATTG CTCTTGATGA GGTGCAGGAT CCGGGTAATG TCGGTACCAT TCTTCGCACG
GCAGCCTGGT TCGGCGCAGA TGCTCTGATC TGTTCAACAG GCACTGCCGA TCGGTATAAC
GCAAAAGTCG TTCGTTCCTC TGCCGGAAGT CTTTATGCCC TTCCTCATTA TACCGTTGAA
CGCCTTGATC TTGCCCTCGA AGAACTTGCA GCGTCTGGTT ACGCCATCAT CTGTTCCTCT
CTTGATGGTG AGGATTTCAG GAGTTTCGTG AGTTGGCCGC AAAAGCAGGT TCTCGTTATA
GGCAATGAAG CCAACGGGGT TAGCCGTGTG GTTCAGAATC TTGCCGAAAG GCTTGTGCGG
ATTCCTCATG GCGGGGGCAA ATCGAGAGTT GAATCCCTGA ATGCTTCCGT ATCCGCCGCG
ATCCTTATGG AGCGTCTGGT GTTATAG
 
Protein sequence
MTSSDLNPLS KVKLRRFVKL QEKKYRDQDG LFLAEGLRTV RELCQNIPDE SMLLALLLRE 
GEIGLGGFPE IPEDKLYVMN SEQCSLLSST AAPQGVIGVF RQQQVSRYPC GFKDEKKGRS
LLIALDEVQD PGNVGTILRT AAWFGADALI CSTGTADRYN AKVVRSSAGS LYALPHYTVE
RLDLALEELA ASGYAIICSS LDGEDFRSFV SWPQKQVLVI GNEANGVSRV VQNLAERLVR
IPHGGGKSRV ESLNASVSAA ILMERLVL