Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2163 |
Symbol | |
ID | 4570764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2504876 |
End bp | 2505682 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639766738 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_912592 |
Protein GI | 119357948 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0955758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCGA GTGATCTTAA TCCGTTAAGC AAGGTGAAGC TGCGCAGGTT TGTTAAGCTT CAGGAAAAAA AGTATCGGGA CCAGGATGGG CTGTTTCTTG CTGAAGGTCT TCGTACCGTC AGGGAGCTCT GCCAGAACAT TCCCGACGAG AGCATGCTTC TTGCTCTCTT GCTTCGGGAA GGGGAGATCG GGCTTGGCGG ATTTCCTGAG ATTCCGGAAG ATAAGCTGTA TGTGATGAAC AGTGAGCAAT GTTCTCTGCT TAGCAGTACC GCTGCGCCAC AGGGCGTTAT CGGGGTTTTT CGTCAGCAGC AGGTGAGTCG GTACCCATGC GGTTTTAAAG ACGAAAAGAA AGGGCGCTCT TTGCTTATTG CTCTTGATGA GGTGCAGGAT CCGGGTAATG TCGGTACCAT TCTTCGCACG GCAGCCTGGT TCGGCGCAGA TGCTCTGATC TGTTCAACAG GCACTGCCGA TCGGTATAAC GCAAAAGTCG TTCGTTCCTC TGCCGGAAGT CTTTATGCCC TTCCTCATTA TACCGTTGAA CGCCTTGATC TTGCCCTCGA AGAACTTGCA GCGTCTGGTT ACGCCATCAT CTGTTCCTCT CTTGATGGTG AGGATTTCAG GAGTTTCGTG AGTTGGCCGC AAAAGCAGGT TCTCGTTATA GGCAATGAAG CCAACGGGGT TAGCCGTGTG GTTCAGAATC TTGCCGAAAG GCTTGTGCGG ATTCCTCATG GCGGGGGCAA ATCGAGAGTT GAATCCCTGA ATGCTTCCGT ATCCGCCGCG ATCCTTATGG AGCGTCTGGT GTTATAG
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Protein sequence | MTSSDLNPLS KVKLRRFVKL QEKKYRDQDG LFLAEGLRTV RELCQNIPDE SMLLALLLRE GEIGLGGFPE IPEDKLYVMN SEQCSLLSST AAPQGVIGVF RQQQVSRYPC GFKDEKKGRS LLIALDEVQD PGNVGTILRT AAWFGADALI CSTGTADRYN AKVVRSSAGS LYALPHYTVE RLDLALEELA ASGYAIICSS LDGEDFRSFV SWPQKQVLVI GNEANGVSRV VQNLAERLVR IPHGGGKSRV ESLNASVSAA ILMERLVL
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