Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2161 |
Symbol | |
ID | 4570762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2503547 |
End bp | 2504389 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639766736 |
Product | UspA domain-containing protein |
Protein accession | YP_912590 |
Protein GI | 119357946 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.551312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCAGCA ACTCTTTTTT AATACGAACT ATTGCTGTCG CCATCGACTG TTCGCCCCAC AGCCTGGCGT CACTTAACAC AGCAGCAGAA CTCGCAGGGT TCCTTCATGC AAATCTCACG GGTATTTTTG TTGAAGATAT TAATCTTCTC CGTCTGGCTG ATATTCCCTT AAGTCGGGAA ATTGACTTTT TTTCAGAGAA AACCGAAAAC ATTGAAATCA CCGGGCTTGA ACAACTGCTT CAAATACAGG AACAACAGGC GGAAACATCG CTGCAGAAGG CAGCCGGAAA GTTCATGGTC AAACACACGT TCAGAGTCTG TCGGGGAAAA GTACCTGAAG AGGTCGTTAT CGCATCTCTC GAAGCCGACC TGCTCGTGCT TGGACGCCGC GGAAAATCGC CAACCTGCCG CAAAGGGCTC GGATCAACAG CACAAAACGC ACTTAAGCAG AGAAAAAAAA CAGTGCTCTT CATGCGCTCC GGTTTTTCTG TTCAGGAAGA GTCGGCTCTG GTGCTGTACG ATGGGTCCGC TGCGTCTGAA ACTGCACTTG ATGCTGCCAT GAACGTAATT CGCCCAGGCA ATACGCTTCA GATTCTCATG CTCCCTTTTG AGAAAAATGA ACGCGACATG GAAACCGGGC TATCGGAAAG GTTCGCCTCC GACATGCCGA AGATAGAGTA TCACGCAATA CCGCCGGTAA CCGACGGGAA AGCGCTTGCC CGATATATAA GAATGGCCGA TTCAGGCCTG CTCTTCCTCA GCGACCGCAT GAACCTGCCC TCTGAAACTG TGCATAGTCT CGTTAACAAA ATTGACTATC CGGTAATGGT CGTAAGAGGC TAA
|
Protein sequence | MSSNSFLIRT IAVAIDCSPH SLASLNTAAE LAGFLHANLT GIFVEDINLL RLADIPLSRE IDFFSEKTEN IEITGLEQLL QIQEQQAETS LQKAAGKFMV KHTFRVCRGK VPEEVVIASL EADLLVLGRR GKSPTCRKGL GSTAQNALKQ RKKTVLFMRS GFSVQEESAL VLYDGSAASE TALDAAMNVI RPGNTLQILM LPFEKNERDM ETGLSERFAS DMPKIEYHAI PPVTDGKALA RYIRMADSGL LFLSDRMNLP SETVHSLVNK IDYPVMVVRG
|
| |