Gene Cpha266_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2161 
Symbol 
ID4570762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2503547 
End bp2504389 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID639766736 
ProductUspA domain-containing protein 
Protein accessionYP_912590 
Protein GI119357946 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.551312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGCA ACTCTTTTTT AATACGAACT ATTGCTGTCG CCATCGACTG TTCGCCCCAC 
AGCCTGGCGT CACTTAACAC AGCAGCAGAA CTCGCAGGGT TCCTTCATGC AAATCTCACG
GGTATTTTTG TTGAAGATAT TAATCTTCTC CGTCTGGCTG ATATTCCCTT AAGTCGGGAA
ATTGACTTTT TTTCAGAGAA AACCGAAAAC ATTGAAATCA CCGGGCTTGA ACAACTGCTT
CAAATACAGG AACAACAGGC GGAAACATCG CTGCAGAAGG CAGCCGGAAA GTTCATGGTC
AAACACACGT TCAGAGTCTG TCGGGGAAAA GTACCTGAAG AGGTCGTTAT CGCATCTCTC
GAAGCCGACC TGCTCGTGCT TGGACGCCGC GGAAAATCGC CAACCTGCCG CAAAGGGCTC
GGATCAACAG CACAAAACGC ACTTAAGCAG AGAAAAAAAA CAGTGCTCTT CATGCGCTCC
GGTTTTTCTG TTCAGGAAGA GTCGGCTCTG GTGCTGTACG ATGGGTCCGC TGCGTCTGAA
ACTGCACTTG ATGCTGCCAT GAACGTAATT CGCCCAGGCA ATACGCTTCA GATTCTCATG
CTCCCTTTTG AGAAAAATGA ACGCGACATG GAAACCGGGC TATCGGAAAG GTTCGCCTCC
GACATGCCGA AGATAGAGTA TCACGCAATA CCGCCGGTAA CCGACGGGAA AGCGCTTGCC
CGATATATAA GAATGGCCGA TTCAGGCCTG CTCTTCCTCA GCGACCGCAT GAACCTGCCC
TCTGAAACTG TGCATAGTCT CGTTAACAAA ATTGACTATC CGGTAATGGT CGTAAGAGGC
TAA
 
Protein sequence
MSSNSFLIRT IAVAIDCSPH SLASLNTAAE LAGFLHANLT GIFVEDINLL RLADIPLSRE 
IDFFSEKTEN IEITGLEQLL QIQEQQAETS LQKAAGKFMV KHTFRVCRGK VPEEVVIASL
EADLLVLGRR GKSPTCRKGL GSTAQNALKQ RKKTVLFMRS GFSVQEESAL VLYDGSAASE
TALDAAMNVI RPGNTLQILM LPFEKNERDM ETGLSERFAS DMPKIEYHAI PPVTDGKALA
RYIRMADSGL LFLSDRMNLP SETVHSLVNK IDYPVMVVRG