Gene Cpha266_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1943 
Symbol 
ID4570057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2253049 
End bp2254248 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content53% 
IMG OID639766525 
Producttryptophan synthase subunit beta 
Protein accessionYP_912383 
Protein GI119357739 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.233821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCGT TTCACTATTC AGTTCCTGAT TCAAAAGGGC ATTTCGGTAA ATTCGGCGGG 
AAATTTATCC CGGAAACCCT TATAAAAAAC GCAGCCGATC TTGAGCTCGA ATACAGCCGG
GCAAAGAATG ACCCGGTTTT TCAGACAAGG CTTGCAACGC TGCTGCGTGA CTATGTCGGA
AGACCTACCC CGCTCTACCT TGCCGAAAGA TTGAGCGGAA TGCTCCAGGG AGCGCGCATC
TACCTGAAAC GTGAAGACCT CTGTCACACA GGCGCACACA AAATCAATAA TGCGCTCGGG
CAGGTGCTGC TCGCTGAAAG AATGGGCAAA AAACGGGTTA TCGCCGAAAC CGGAGCCGGC
CAGCACGGCG TAGCCACCGC TACGGTCTGC GCCCTGTTCG GCATCTCATG CGTTGTCTAC
ATGGGCGAAG AAGATATCCG CCGCCAGTCG CCGAATGTTG CTCGAATGAA ACTGCTCGGC
GCTGAAGTCA GACCTGTCGG TTCAGGCTCG AAAACACTGA AAGACGCAAC AAGCGAAGCG
ATACGGGACT GGATGAACAA CCCTGAAGAT ACCTTTTACA TTATCGGCTC CGTTGTGGGT
ATGCACCCTT ATCCCATGAT AGTAAGGGAT TTTCAGTCGG TCATCGGCCG CGAAACCAGA
ACGCAGGTTC TCGAACAGGC AGGAAAGCTC CCCGATGTCA TCACAGCCTG CGTCGGTGGA
GGAAGCAATG CCATAGGAAT CTTTCATGAA TTTCTTCCGG ACGTTCCCGG CGTTGAACTG
GTTGGCGTTG AAGCAGCCGG AGAAGGACTT CAGGGACGTC ATGCCGCATC ACTCACCATG
GGTAAAACCG GCGTACTGCA CGGCGCCATG ACAAAACTGC TGCAGGATGA AGACGGCCAG
ATCCTTGAAG CGCACTCCAT TTCAGCCGGA CTCGATTATC CGGGAGTAGG ACCTGAACAC
TGCTATCTGC AACGAAAAGG TCTGGTCAGC TATACATCGA CTACAGACAA AGAAGCACTT
GAGGCGCTTA AAACACTCGC AGCAACCGAG GGAATCATCT GCGCGCTTGA ATCAGCCCAT
GCCGTACACT ATGCCATAAA AAGAGCGCCA GAGATGCCGA AAGATGCCAT TCTTGTTGTA
AACCTCTCCG GAAGGGGCGA CAAGGATATG GAAACAATAA TGCAGAGTAT CCCTCTCTGA
 
Protein sequence
MVPFHYSVPD SKGHFGKFGG KFIPETLIKN AADLELEYSR AKNDPVFQTR LATLLRDYVG 
RPTPLYLAER LSGMLQGARI YLKREDLCHT GAHKINNALG QVLLAERMGK KRVIAETGAG
QHGVATATVC ALFGISCVVY MGEEDIRRQS PNVARMKLLG AEVRPVGSGS KTLKDATSEA
IRDWMNNPED TFYIIGSVVG MHPYPMIVRD FQSVIGRETR TQVLEQAGKL PDVITACVGG
GSNAIGIFHE FLPDVPGVEL VGVEAAGEGL QGRHAASLTM GKTGVLHGAM TKLLQDEDGQ
ILEAHSISAG LDYPGVGPEH CYLQRKGLVS YTSTTDKEAL EALKTLAATE GIICALESAH
AVHYAIKRAP EMPKDAILVV NLSGRGDKDM ETIMQSIPL