Gene Cpha266_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1870 
Symbol 
ID4571212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp2167478 
End bp2168482 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID639766452 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_912310 
Protein GI119357666 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.151042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG TGAAAGTCGG CATTAATGGA TTTGGCCGAA TCGGACGTCT GGTGCTTCGG 
CAGGCAATGA ACAACCCGAA TTTTGAAATT GTTGCTATCA ACGATCTGTG CGATACCAAA 
ACCCTCGCAC ATCTGCTCAA GTATGACTCA ACACACAAGA AATTTTCAGG TGAAGTACGG 
GTCGAAGGTG AAAACCTTGT CATCAACGGC CAGACCGTTA CCATCAGCGC ACAGCGCGAT 
CCCCTCCAGC TTCCATGGAA GGAACTCGGA TGTGACCTGG TAGTTGAATC AACAGGTATT 
TTCACATCGA GAGAGGCTGC TTCAAAGCAT ATCACTGCCG GGGCAAAAAA GGTTATCATT 
TCCGCTCCCG CAAAAGACAA GATTGATGCA ACCATTGTGA TGGGCGTCAA TGACAGCATC 
ATTACCGGAA ATGAGGAGAT CATTTCGAAT GCAAGCTGCA CAACCAACTG TCTGGCCCCG 
ATGGTAAAAG TTCTTCAGGA CAGCTTTGGT ATCGCCCAGG GATTCATGAC CACGGTGCAC 
GCCTACACCA ATGATCAGAA CATCCTCGAT TTACCGCACA AGGATCTTCG TCGCGCACGC 
TCTGCCGCAC TTTCGATCAT CCCGACCAGT ACCGGTGCAG CAAAGGCTAT CGGAGAGGTA 
ATTCCTGAAC TTGCCGGAAT TCTTGACGGG TTTGCCATGA GAGTACCTGT ACCTGACGGC 
TCCGTCACTG ATCTTACCGT CATCCTGAAC CGCGAGACCT CAAAAGCAGA GGTTAATGCA 
GCGGTTAAAG CCGCCGCTGA CGGCCCGATG AAAGGATATC TCGAATACTG TGAAGACCCG 
ATCGTTTCAC AGGACATCGT AGGCAATGCC CACTCCTGCA TTTTCGACTC CTTGTTGACT 
ATGAGCGTAG GAAAAATGGT TAAAGTTGTC GGCTGGTATG ACAACGAACT TGGTTATGCC 
ACAAGGGTCA CCGACCTTCT CAATATTTAC TCGAAGTACG TCTGA
 
Protein sequence
MAKVKVGING FGRIGRLVLR QAMNNPNFEI VAINDLCDTK TLAHLLKYDS THKKFSGEVR 
VEGENLVING QTVTISAQRD PLQLPWKELG CDLVVESTGI FTSREAASKH ITAGAKKVII 
SAPAKDKIDA TIVMGVNDSI ITGNEEIISN ASCTTNCLAP MVKVLQDSFG IAQGFMTTVH 
AYTNDQNILD LPHKDLRRAR SAALSIIPTS TGAAKAIGEV IPELAGILDG FAMRVPVPDG 
SVTDLTVILN RETSKAEVNA AVKAAADGPM KGYLEYCEDP IVSQDIVGNA HSCIFDSLLT 
MSVGKMVKVV GWYDNELGYA TRVTDLLNIY SKYV