| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1747 |
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| Symbol | |
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| ID | 4571109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1973891 |
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| End bp | 1975072 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639766330 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_912188 |
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| Protein GI | 119357544 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.570517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGTC AAAAAGAAGA AGGAGAAAAA CAGCCTGTTG CGACTGAAAA GGCTGCCGAA
GTTCACGTTA AAAGCTATCG GGATACCGGC AGTACGATCC GTCTCGGAAT ATGGATACTT
CTTGTCGGCT TTGGCGGTTT TCTGTTGTGG GCGGCATTTG CACCGCTTGA CGAAGGAGTT
CCCTGCCAGG GCGTTGTCAG TATTGCTACC AAGCGAAAGG TCGTTGAGCA TCTTCGAGGT
GGTACCGTTG AGAAGGTTGA GGTGCGGGAA GGTCAGATCG TACAGGAGGG AGAGGTGCTG
ATGAGACTTG ACAGCCAGAC GGCAAGGGCG CGGTACGATG AGATTCATCA GCACTATATC
GGTACAAGAG CTACGGCAGA CAGGCTGCTT GCGGAGATGA GCGGAGCAGG ATCAATTGCT
TTTCACCATG ATCTTCTTGC CGATCCGGAT CGAACTCTTG CCGAACAGAA TATGCGGACA
CAGAGGCAGC TTTTTCTCTC CCGCCAGGTT ACGCTAAGGA TTCTCAATGA ACAGCTCTCT
GGTATTGTCT CGCTTGTCAA GGAAGGTTAT GCCCCCTTGA GTCAGCAGCA CGAGCTGGAG
CTGAAGATTG CAGAGCTGAA GAGTGCAACA GCCTCGCAAC TCGCACAGGT GCAGCTTGAA
GTAGAAGCCG ACGCGGAAAA GACTCGAGCC CTTGCTGAAG AGCTTGCCGA TACTGAACTC
CGATCTCCCG CCTCAGGACA GGTGGTGGGC CTGCAAGTAC AGACCGTTGG TGCCGTGATT
CAGCCAGGTC AGAAGGTTAT GGATATCGTT CCGCTTCATG AAGGCCTGCT CATAGATGCC
AAGGTTGCCC CGCATCTGAT CGACAGCATC CGTAAGGGAC TGCCGGTGGA CGTGAGCTTT
TCCTCATTTG CACATGCGCC CCAGCTTGTT GTGCAGGCTG TGGTTGCTTC GATCTCAAAA
GATATTATTA CGGACCCGCA GACAAACCCG TCGATGCCTG GAGCCTCCTA TTACCTTGCC
CGGATTGCGG TGACCCCGCA TGGACTCAAC TCTCTCGGAA ATCGTCAGAT GCAGCCGGGA
ATGCCGGTAC AGGTGGTTAT TAAAACCGGG GAACGTTCCC TGCTGACCTA CCTGATTGAT
CCGCTGCTCA AGCGGATTAC AGTCTCCATG AAGGAGGAGT GA
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| Protein sequence | MHSQKEEGEK QPVATEKAAE VHVKSYRDTG STIRLGIWIL LVGFGGFLLW AAFAPLDEGV
PCQGVVSIAT KRKVVEHLRG GTVEKVEVRE GQIVQEGEVL MRLDSQTARA RYDEIHQHYI
GTRATADRLL AEMSGAGSIA FHHDLLADPD RTLAEQNMRT QRQLFLSRQV TLRILNEQLS
GIVSLVKEGY APLSQQHELE LKIAELKSAT ASQLAQVQLE VEADAEKTRA LAEELADTEL
RSPASGQVVG LQVQTVGAVI QPGQKVMDIV PLHEGLLIDA KVAPHLIDSI RKGLPVDVSF
SSFAHAPQLV VQAVVASISK DIITDPQTNP SMPGASYYLA RIAVTPHGLN SLGNRQMQPG
MPVQVVIKTG ERSLLTYLID PLLKRITVSM KEE
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