| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1746 |
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| Symbol | |
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| ID | 4571108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1972472 |
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| End bp | 1973812 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639766329 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_912187 |
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| Protein GI | 119357543 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTT TTTGGTATGT AATTCTTATA GCAGGCAGTT TTGTTTCGCC GCCTCTTTAT
GCCGCGCCAG TCACTATATC GGAAGCTTAT CTGAAAGCCC GAGATCATGA TGCCCTGCTG
GGTGCGGCAA AGGCTGATAA TCTGGTGTAT AAAGAGGAGG TCGGCAAGGC GAGGGCCGGT
TTACGCCCCA GTGTACGTCT GAACGCCTCA CGCGGCCGCA ACGGCACACA GCATGGTTAC
ATGGGACTAT ATGAGGCGCC TGATTTTTAT AATACGGTCG TCTATGGTGT GACGCTTCGT
CAACCATTGA TTAATCTGTC GAATATAGCT GAATACCAGC AGGCGAAAGC TGTGGCGGCA
AAAAGTGATG CTGAATTGCG GAAAGAAGAG GCTGATCTGA TTGTCAGACT TGCCGAGACC
TATTGTAACG CATTGTATGC CGAGGATAAC CTTACCTTCA GTCAGGCTCA TATCAAGGCT
TCGGAAGAAC AGCTTCAGCA GGCGAAACGA CGGTTTGAAA AAGGGTTCGG AACCATTACC
GAAATAAATG AAGCGCAGGC TGACCTCGAT ATGGCGCTTG CTGAGGGACT TGAAATCGTC
AACAGCGTCG AGTTCAGCCG CCGTGAGCTG GAGCATCTTA TCGGAACGTA TCCTGATGAA
CTCTGCAAGT TGGCGCCTGA AAAACTTGTG TTGGCCCGAC CGACGCCAGG TCGTGTGGAA
TCTTGGATTG ATCGAGCTCA TGGAGAGAGT CCTCGAAGCT CGGCAGCGCA CCTTGAGATG
CAGATCGCAA AAAAAGAGAT CGAAAAACAG AAGGCAAGCC GTTATCCGAC GATTGATCTT
GTTGCCGGGA GAAGCTATTC CGAGAGTGAA AATAATTATT CAATCGGCTC AACCTATGAA
ACCTATTCGA TCAGTCTGCA AATGAGCATG CCGATTTATA CCGGTGGTTA TGCCAGTGCA
TCGATCCGGC AGGCAAAAGC AAAGTGGCTT AAAGCGGGTG AGCAGTTTTT CTGGCAGGAA
CGGAGCATCG AATCTGAAGT ACGCAAGTAC TATAATACGG TTATCAGTAC GATCGCACAG
ATCCAGGCCT ATGAACAGGC GGTCAAATCC CGGGAAATTG CTCTCGACGG CACAAAAAAA
GGGTTTGGTG CTGGTCTGCG CAGTAATGTG GATGTTCTTG ACGCTCTTCA GAATCTTCTT
GCCGCCAGAC GTAATCTTGC GAAGTCGCGA TACCAGTATA TTCTTGCCCG TCTTTCGCTC
AAGCAGACCG CAGGAGCATT GTCGCCCGCT GATATTGAGG AGATCAATGG CTGGTTTGCA
ACGGCAAAAA CAGCGAAATA G
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| Protein sequence | MKSFWYVILI AGSFVSPPLY AAPVTISEAY LKARDHDALL GAAKADNLVY KEEVGKARAG
LRPSVRLNAS RGRNGTQHGY MGLYEAPDFY NTVVYGVTLR QPLINLSNIA EYQQAKAVAA
KSDAELRKEE ADLIVRLAET YCNALYAEDN LTFSQAHIKA SEEQLQQAKR RFEKGFGTIT
EINEAQADLD MALAEGLEIV NSVEFSRREL EHLIGTYPDE LCKLAPEKLV LARPTPGRVE
SWIDRAHGES PRSSAAHLEM QIAKKEIEKQ KASRYPTIDL VAGRSYSESE NNYSIGSTYE
TYSISLQMSM PIYTGGYASA SIRQAKAKWL KAGEQFFWQE RSIESEVRKY YNTVISTIAQ
IQAYEQAVKS REIALDGTKK GFGAGLRSNV DVLDALQNLL AARRNLAKSR YQYILARLSL
KQTAGALSPA DIEEINGWFA TAKTAK
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