Gene Cpha266_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1161 
Symbol 
ID4570738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1308424 
End bp1309170 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID639765754 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_911622 
Protein GI119356978 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0328749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACGT TTAATGTTCT CACGGTTCTG ATTCTGGTCG GCGTTTTCTT CTTTTCGGCA 
GTTAAAATTC TCAGGGAGTA CGAACGCGGC GTTATTTTTC GCCTCGGCCG CGCCATAGGC
CCGAAAGGAC CGGGGCTTAT CATTCTTCTT CCCGGTATTG ACAAAATGGT GAAGGTAGAT
CTCAGAACGG TAACGCTTGA TGTGCCTCCG CAGGATATTA TCACTCGTGA TAACGTTTCG
GTTAAAGTGA GCGCTGTGGT CTATTTCAGG GTTCTGGATT CCATGAAGGC AATACTCGAT
GTGGCTGATT TTCATTTCGC TACGTCACAA CTTGCCCAGA CAACCCTGAG AAGCGTTTGC
GGTCAGGGTG AGCTCGATAA CCTGCTTGCC GAAAGAGATG AAATCAATGA ACGAATCCAG
AATATCCTTG ACAAGGATAC CGAACCATGG GGGGTGAAGG TAAGCAAGGT TGAGGTTAAG
GAGATCGATC TTCCAGAAGA GATGCGCCGG GCCATGGCCA AACAGGCTGA AGCTGAAAGG
GAGAGACGTT CCAAAATCAT CAATGCGGAA GGGGAGTTTC AGGCTGCGCA GCGACTGGCC
GACGCGGCGG CAATTATCTC CTCCGCCCCT GCGGCTCTCC AGTTGCGTTA TTTGCAGACT
TTGAAGGATA TTGCCGGACA GAATAATTCA ACAACCATTT TTCCGGTACC TATTGATCTG
CTGAGAGCTT TTATGGAAAA CAAGTAA
 
Protein sequence
MLTFNVLTVL ILVGVFFFSA VKILREYERG VIFRLGRAIG PKGPGLIILL PGIDKMVKVD 
LRTVTLDVPP QDIITRDNVS VKVSAVVYFR VLDSMKAILD VADFHFATSQ LAQTTLRSVC
GQGELDNLLA ERDEINERIQ NILDKDTEPW GVKVSKVEVK EIDLPEEMRR AMAKQAEAER
ERRSKIINAE GEFQAAQRLA DAAAIISSAP AALQLRYLQT LKDIAGQNNS TTIFPVPIDL
LRAFMENK