| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1086 |
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| Symbol | truA |
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| ID | 4570030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 1228803 |
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| End bp | 1229579 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639765683 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_911551 |
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| Protein GI | 119356907 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0863956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGCTA AAGATTTTCT TTTTATGAAG AACATCAGGA TTACCATTGA ATATGATGGA
ACCGGATATG CCGGGTGGCA GAGACAGGCA GGCTCTTTTT GCACGGTGCA GGGAGAGATT
GAGCGTATTC TCAGTCAGAT ATTACAGGAA GATATACGGC TTGCCGGGGC AGGACGAACT
GATAAGGGCG TTCATGCCCG GGCACAGATC GCCACGTTCA AAAGTCGTTC ATCCCTGGGG
CCAGACAGAA TGGTTCACTC AATGAATGCG CTGTTACCAA ACACCATAAG AATCAGTGAT
CCCCTCGTGG TTCCGGAGGG GTTTCATGCC CGTCATAGCG CAAAAGAAAG AGAGTACAGG
TATTTTGTTC GTGAAGAGCC ATCTGCGGTG CTTGGGCGTT TCAGCGGATG TTCTTATGGT
TCGCTGGATC TCATGTCCAT GAACCGGGTA GCATCTTATG TTCTTGGTGA GCATGACTTT
TCCGTTTTTT CAAAAGAAAC ACGAGACAGG ACGGGGTGTC TGTGCAGGGT TATCTCCTGC
AAATGGTTTC GTCAACGGGA ATTTTTTGTG CTCAGGATCT CGGCTAACCG ATTTCTGCGG
TCAATGGTGC GTTATCTGGC GGCCTTGATG ATTGATTCAG GCAAAGGTCT TCTTTCTCCC
GAAGAAGCCA GGGAGATGAT TGAGTCCGGC ATCCTGACAA GGCAACTTGT GCCGGCAGCA
CCAAACGGTC TTTTTTTGTG GAAGATCACC TATGGAAGTG ATTCTCATTC CTTCTGA
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| Protein sequence | MLAKDFLFMK NIRITIEYDG TGYAGWQRQA GSFCTVQGEI ERILSQILQE DIRLAGAGRT
DKGVHARAQI ATFKSRSSLG PDRMVHSMNA LLPNTIRISD PLVVPEGFHA RHSAKEREYR
YFVREEPSAV LGRFSGCSYG SLDLMSMNRV ASYVLGEHDF SVFSKETRDR TGCLCRVISC
KWFRQREFFV LRISANRFLR SMVRYLAALM IDSGKGLLSP EEAREMIESG ILTRQLVPAA
PNGLFLWKIT YGSDSHSF
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