| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0875 |
|---|
| Symbol | |
|---|
| ID | 4570469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 996912 |
|---|
| End bp | 998132 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639765470 |
|---|
| Product | L-alanine dehydrogenase |
|---|
| Protein accession | YP_911347 |
|---|
| Protein GI | 119356703 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATACA GTGGTGATAC AGAAAGTATT GAGTTTGAGC TTGGAGTAAA AACCCTTGAG
CGCTGGCTGA TCAAGCCTGG AAAAACGATG AACATCGTTC TCGGTATTCC AAAAGAACGC
GCTCAGGACG AACGACGGGT CGCCATCTCT CCTGCCGGCG TGCAGATTCT GACCGAACAT
GGAATCAGGG TGGTTATTGA ACAGTCGGCC GGACATTTCT GTAATTTTTC CGATATCGAT
TATTCTGAAG CAGGTGCGGT TATTGTTGCT TCACCTGAAG AACTTTTTGC CGATTCCAAC
GTCATTGTCA AGGTTTCTCC GCCTCAGCCG GAAGAACTGC CCCTGTTCAC TCCCGGCCAG
ATGCTGATTT CAGCGCTGCA TCTTGGAACA GTAAGCCGCC ACGTCATCGA AACGCTGCTG
GAAAAAAACA TCACCGCTCT TGGTTTTGAA TTTATCGAGA CCAAAGATGG CGAACTGCCG
ATTGTCAGAA CGCTGAGTGA AATAGCAGGC TCTCTTGCTA TTCAAACCGC TGCAAAATAT
CTTGAAACCG GCTATGGAGG CAGCGGAATT CTTCTTGGCG GCATTGCCGG GGTGCCTCCT
GCACACGTCA CAATCGTAGG CGCCGGCACA GTAGGCCTTT TTGCGGCTCA GGATGCGCTC
GGACTTGGAG CCCAGGTAAC AGTTATCGAC AAGGAGATCA ACCGACTGAG AAGATTTGAA
GCTTTTTTCA ACCGGCATCT GGTCACCGCA ATAGCCAATG ATCACTACAT AGCCGAAATT
GCCCGATTTT CGGATGTCAT GATCGGTGCG TTGAGCCCGA AACAAAAAAT AATAAAACCG
CTCGTAAGCG AACAGGTCGT CAAATCCATG AAACCGGGTT CCGTCATTAT TGACGTTTCT
ATCGACCAGG GCGCATGTTT CTCAACAAGC CGGCACACCT CCCACACCAA TCCTATTTAT
GTCAAGCACG GAGTAACACA TTATTGCGTC CCTAACATAC CCTCAGCCGT TGCAAAAACC
GCTTCATTTG CTCTCACCAA CACCCTGCTG CCGTTTCTCC TGAAACTATC GGAGCATGAA
ACCATTTCCG ATATTCTCTG GAAAAGCCAC AGCCTGAGAA AAGGCACCTA TATATTCAAG
GGATATGTAA CCCGGAAAAT TCTTGCGGAG CTTCTCGATT TTCCTTTCCG CGAAATTGAC
ATGTTGCTTG CTGCGAGTTG A
|
|---|
| Protein sequence | MGYSGDTESI EFELGVKTLE RWLIKPGKTM NIVLGIPKER AQDERRVAIS PAGVQILTEH
GIRVVIEQSA GHFCNFSDID YSEAGAVIVA SPEELFADSN VIVKVSPPQP EELPLFTPGQ
MLISALHLGT VSRHVIETLL EKNITALGFE FIETKDGELP IVRTLSEIAG SLAIQTAAKY
LETGYGGSGI LLGGIAGVPP AHVTIVGAGT VGLFAAQDAL GLGAQVTVID KEINRLRRFE
AFFNRHLVTA IANDHYIAEI ARFSDVMIGA LSPKQKIIKP LVSEQVVKSM KPGSVIIDVS
IDQGACFSTS RHTSHTNPIY VKHGVTHYCV PNIPSAVAKT ASFALTNTLL PFLLKLSEHE
TISDILWKSH SLRKGTYIFK GYVTRKILAE LLDFPFREID MLLAAS
|
|---|
| |