Gene Cpha266_0444 details

Gene Information

• Locus tag: Cpha266_0444
• ID: 4569233
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 490938
• End bp: 492941
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 639765044
• Product: TonB-dependent receptor
• Protein accession: YP_910926
• Protein GI: 119356282
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TAGTACTTCT CGTATTGCTT CTTGCTGCCA CTGAAACGGT TTTTGCAGCG 
GAACTTCCAT CCGATCTCCC GGTATCAGGG ATAAAAGTGT TTACTGCCGG TGAGGTAACG 
GTCAGCGGGA AAAAAGACCA TGCGAAGGAA ACGGTTGCCG CAACCGAAAT GGAGATGCTC 
GACAAAAAAA ATATTGCGCA GGCGGTCAAT ATGCTTCCCG GCATCAATGT GAGTAATGTT 
GGCGGAAGAA ATGAGGGGAT GGTCTATGTC CGGGGTTTTG ACATGCGTCA GGTTCCGCTC 
TATCTTGACG GTATTCCTCT CTATGTTCCC TATGACGGCT ATATCGATCC AAACCGGTTT 
ACGACGTTTG ATCTGTCGGA GATCAACGTT TCAAAGGGTT TCACTTCGGT ACTCTATGGT 
CCGAATACCC TTGGAGGAGC GATTAACATG GTAAGTCGAA AACCGGCAGA GAGGTTTGAA 
GGCAGCTTGA AGGGCGGCCT CACGTTCAGC GATGAAGGAT TGGCGTCGGA ATTTGCCTCA 
CTCAATCTTG GCAGCAACCA GGGAACATGG TATGTCCAGG GAAGTCTCTC GATTCTTGAT 
CGTGATTTCA TGCAGCTTTC AGATTCCTTT CTTGCAACGA AAAGTGAAGA TGGCAGCAAG 
CGAGATAATT CGGATTCGCG AGATTTCAGG GGCTCTTTGA AAGTCGGATA TACGCCGAAC 
TCGACCGATG AGTATTCGCT GAGCATCATA TCACAACAGT CAAGCAAGGG TGTACCGGTC 
TATACAGGCA TTAACCCGAC GCAAACGGTG CGCTACTGGA GGTATGGCGA CTGGGACAAA 
TCGAGCATCT ACTTTATCGG CAAAAAAGCC CTTGGCAGCA AAAGCTATCT CAAGGCAAGG 
GCTTATTATG ACAACTATTA TAATACCCTG CAGAGCTATG ACGACGCTTC CTACGCCACG 
CAAAAGACCA AAAAAGCGTT TTCAAGCCGT TATGATGATA AAACCTTTGG CGGTTCCATC 
GAGTTTGGTA CGGAAATCCT GAGCGGAAAT ACCTTGAAAA TCGCTCTGCA TGACAAGTAT 
GACATGCACA ATGAAATTGG TAATACCGGC GAGATGCCGA AAGAGTTTGA AGACAATACC 
GTTTCAGTAG CCGCTGAAAA TACCTGGAAG GCTTCAGACA ATATCTCGGT TATAGCGGGT 
GTTCGCCAGG ATTTTCGGCA TACCATCAAG GCAGAGGATC TTGTTGGCGG CGTCATCACC 
TCCTTTCCGC TTGAGGATAA CCAGGCGACA AATCTTCAGC TTGCCGTTGT CGGACGTCTC 
AGCGAGAGTC AGGAGCTGAC GGCATACCTT ACCAGAACGA CACGGTTTCC TACATTGAAA 
GATCGATACT CATACCGCCT GGGCAATGCT TTTCCGAATC CGGAGCTCAA GCCGGAGCAG 
AGCCTCAACT ATGGGCTTGA TTATGCCATA AGACCGGCAG ATCAACTCAA ATTTCAGGCT 
TCAGTGTACC AGAGCAAGCT CAGTGATGTG ATCCAGCAGG TGAACAATAT CGCTTATGTG 
AAGGGGATAT GGGTCTATCA ATTTCAGAAT ACAGGGGAGG CGACCTTTAC CGGATTCGAG 
TGCTCCGTTG ACTGGCAACC GGTTTCATGG CTGAGGGCTT ATAGCGGTTA CAGCTATATC 
GACCGAAAAA ATGACAGCAA CCCTTCTCTG CGTTTTACCG ATATACCCAG GCACAAGTTC 
ACCGGGTATT TGCAGTTCCT CTTTAACAAG GATCGTTGGG CGATCGTCGA ATCCGAATAC 
TATTCCAGGC GGTACAGCAC CAGCGATGGC AAGTATACTG CCGGAGCCTA CGGTCTGATA 
AATCTCAGGG CCAGCACTGT TCTTTACGAT ACGCTTTCGC TTCAGGCATC CGTTGAAAAT 
GTTTTTGACC GGAACTACGA AGTAGCAGAG GGCTATCCGG AGGCGGGTCG TCAGTATGTG 
GTGTCGCTTG CCTGGGCGCT TTGA 

 

Protein sequence

MKKIVLLVLL LAATETVFAA ELPSDLPVSG IKVFTAGEVT VSGKKDHAKE TVAATEMEML 
DKKNIAQAVN MLPGINVSNV GGRNEGMVYV RGFDMRQVPL YLDGIPLYVP YDGYIDPNRF 
TTFDLSEINV SKGFTSVLYG PNTLGGAINM VSRKPAERFE GSLKGGLTFS DEGLASEFAS 
LNLGSNQGTW YVQGSLSILD RDFMQLSDSF LATKSEDGSK RDNSDSRDFR GSLKVGYTPN 
STDEYSLSII SQQSSKGVPV YTGINPTQTV RYWRYGDWDK SSIYFIGKKA LGSKSYLKAR 
AYYDNYYNTL QSYDDASYAT QKTKKAFSSR YDDKTFGGSI EFGTEILSGN TLKIALHDKY 
DMHNEIGNTG EMPKEFEDNT VSVAAENTWK ASDNISVIAG VRQDFRHTIK AEDLVGGVIT 
SFPLEDNQAT NLQLAVVGRL SESQELTAYL TRTTRFPTLK DRYSYRLGNA FPNPELKPEQ 
SLNYGLDYAI RPADQLKFQA SVYQSKLSDV IQQVNNIAYV KGIWVYQFQN TGEATFTGFE 
CSVDWQPVSW LRAYSGYSYI DRKNDSNPSL RFTDIPRHKF TGYLQFLFNK DRWAIVESEY 
YSRRYSTSDG KYTAGAYGLI NLRASTVLYD TLSLQASVEN VFDRNYEVAE GYPEAGRQYV 
VSLAWAL