| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0379 |
|---|
| Symbol | |
|---|
| ID | 4568972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 420548 |
|---|
| End bp | 420943 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639764977 |
|---|
| Product | aspartate alpha-decarboxylase |
|---|
| Protein accession | YP_910862 |
|---|
| Protein GI | 119356218 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0853] Aspartate 1-decarboxylase |
|---|
| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.172281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC ACCTCTTAAA ATCAAAAATC CACAACGCAA GGGTAACAAG CGGAGATCTT
GAATATGAAG GAAGCATCAC GATCGACCAG GAACTTCTCC TTCTGGCCGA GATGATTCCT
AACGAAAAAG TTCTGGTTGT CAATAATAAC AACGGCGAAC GTTTTGAAAC ATATATTATC
AATGGGGAAC CCGGATCAAG AGTAATCCAG CTCAATGGAG CGGCAGCAAG ATGCGCACTG
CCAGGCGATG AAATCATCAT CATGACTTTT GCTGTCATGG ATGAGAAAAA AGCCCGCACC
TTTCAGCCTA TGGTGCTTAT CGTCGACCAT CTCAACAACC CCAAACGCAG ACATCGCATA
GGACAGGAAG ACGAACAACT TTCATCATCC ATTTAA
|
|---|
| Protein sequence | MKLHLLKSKI HNARVTSGDL EYEGSITIDQ ELLLLAEMIP NEKVLVVNNN NGERFETYII
NGEPGSRVIQ LNGAAARCAL PGDEIIIMTF AVMDEKKART FQPMVLIVDH LNNPKRRHRI
GQEDEQLSSS I
|
|---|
| |