| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0234 |
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| Symbol | |
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| ID | 4570801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 260535 |
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| End bp | 265013 |
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| Gene Length | 4479 bp |
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| Protein Length | 1492 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639764838 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_910725 |
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| Protein GI | 119356081 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTT CACAGGGAGC ATCGCCGTTA AAAGGTGATT TTTCAAAGAT AAAGTTCAGC
ATAGCGTCCC CGGAAAGTAT TCTTGCCCAT TCAAGAGGAG AGGTGCTCAA ACCGGAGACG
ATCAACTATC GTACCTTCAA GCCGGAAAGA GATGGTTTGA TGTGCGAGAA AATATTTGGT
CCCACGAAGG ATTGGGAGTG TTATTGCGGT AAATATAAGA GAGTACGCTA TAAAGGCATT
ATCTGCGACC GGTGCGGTGT AGAAGTTACG ACCAAAAGCG TTCGCCGAGA GCGTATGGGG
CATATATCTC TTGCGGTTCC AGTAGTCCAT ACCTGGTTTT TCCGCTCTGT TCCGAGCAAG
ATTGGCGCAT TGCTGGATCT GTCGACAAAA GAGCTTGAAC GAATCATCTA TTACGAGGTC
TATGTTGTTA TCAATCCGGG TGAGCCCGGG GCAAAACAGG GCATAAAAAA GCTTGATCGG
CTCACGGAGG AACAGTACTT CCAGATTATT ACGGAGTATG AGGATAATCA GGATCTTGAT
GATCATGATT CCGACAAGTT TGTAGCAAAA ATGGGAGGCG AAGCGATTCG ACTTCTTTTG
AAGAGCATTG ATCTCAACGA GACGGCTATT CATCTTCGCA AAGTCCTCAA GGAGAGTAGT
TCGGAACAAA AAAGAGCAGA TGCCCTCAAG AGACTGAAGG TCGTCGAGGC ATTCAGAAAG
AGCTACGAGC CACAGAAGAA GACAAGAAAA AAAGCTGTCG GACTTTTTCC TGAAGATGAA
CTGCCCGAGC CCTATGTTTT TGAAGGGAAC AAGCCGGAAT ATATGGTTAT GGAGGTTGTG
CCGGTCATCC CTCCCGAGTT GCGCCCGCTT GTTCCTCTTG AAGGAGGACG GTTTGCGACC
TCAGATCTTA ACGATCTGTA CAGAAGGGTG ATTATTCGCA ACAACCGGCT GAAAAAATTA
ATTGATATTC GCGCTCCAGA GGTTATTCTC CGAAACGAGA AGAGGATGCT GCAGGAAGCC
GTAGACGCTC TGTTCGACAA TTCCCGTAAG GCAAATGCCG TGAAAACGGG AGAGTCCAAT
CGTCCGCTGA AGTCGCTTTC CGACGCCTTA AAAGGCAAGC AGGGTCGTTT CCGTCAGAAC
CTGCTCGGTA AAAGGGTTGA CTATTCAGGG CGTTCAGTTA TTGTGGTTGG ACCAGAGTTG
AAACTGCACG AATGCGGTTT GCCAAAAAGC ATGGCCATCG AACTGTTTCA GCCGTTTGTA
ATACGCAGGC TTGTAGAGCG CGGCATTGCC AAATCGGTTA AATCCGCTAA AAAGCTGATC
GACAAGAAAG ATCAGGTGGT CTGGGATGTG CTCGAAAAAG TTATTGATGG CAGGCCCGTT
CTGCTGAACA GGGCGCCGAC GCTGCACCGT CTTGGCATTC AGGCGTTTCA GCCAGTGCTT
ATCGAGGGAA AGGCCATTCA GATTCATCCG CTGGTTTGTA CCGCGTTCAA CGCCGACTTT
GACGGTGACC AGATGGCTGT TCATGTGCCC CTCTCGCAGG AAGCACAGCT CGAAGCTGCA
CTGTTAATGC TGTCGTCTCA TAATCTTATC CTTCCGCAGT CAGGAAAGCC CGTAACCGTC
CCTTCGCAGG ACATGGTACT CGGCATGTAT TATCTTACCA AATCGCGGCC AGGCGATCCT
GGAGAAGGGC GTATATTCTA CAGCGATGAA GATGTGCTTA TTGCATACAA CGAAGACAGA
ATCGGCCTTC ACGCACAGAT ATTCGTTCAT TTTAACGGAG CGGTTGATCA GAAATTTGAT
CCGCTTCGCG TTCTTGATAC CATAGTTGAT CCAAAGTCCG AAAAATATAC ATGGCTGAAA
TCGCAGCTTG AAAAGAAGAC TATTCTGTTG ACTACCGTTG GCAGGGTGAT TTTTAACCAG
AACGTTCCGG ACTCGATTGG TTTTATTAAC AGAGTTATCG ATAAAAAGGT AGCAAAGGAA
CTGATCGGTC GATTGAGCAG CGACGTTGGT AATGTCGAAA CAGCAAAGTT CCTTGATAAT
ATCAAAGAGG TCGGGTTCCA TTATGCCATG AAGGGAGGAC TTTCAGTTGG TCTTTCCGAT
GCTATTGTGC CCGATACGAA GGTGCGCCAT ATCAAGAACG CGCAAAAAGA CAGTACGAAG
GTTGTCAAGG AGTACAACAG AGGAACGCTG ACAGACAACG AACGTTATAA TCAGATCGTG
GATGTCTGGC AGAAAACCTC CAATATCGTT GCAGAAGAGT CCTATCAGAA GCTGAAAAAG
GACAGGGAAG GTTTCAATCC GCTCTACATG ATGCTTGATT CCGGAGCCCG AGGCTCCCGC
GAGCAGGTAA GGCAGTTAAC CGGTATGCGA GGTCTGATAG CCCGCCCGCA GAAATCCATG
TCAGGCCAGC CTGGCGAAAT TATCGAAAAT CCGATTATTT CTAATCTTAA GGAAGGGTTG
ACGGTTCTTG AGTATTTCAT TTCAACGCAC GGTGCCCGTA AAGGTCTTTC CGATACTTCG
TTGAAAACCG CCGACGCTGG ATACCTTACC AGACGACTGC ATGATGTCGC GCAGGATGTA
ATTGTTACCA TCGAAGACTG CGGCACGACA CGCGGATTGC ATGTGTATCG GAATATCGAG
GAGGAGACAA GCGGCCAGAT CAAGTTCCGT GAAAAAATCA GGGGACGCGT AGCTGCAAGA
GACATCTATG ACACGCTGAA CAATAATGTG ATTGTCAAGG CAGGAGAGAT CATTACCGAA
GAACTGGGTG ATCTTATTCA GGAAACAGCG GGTGTTGAGG AAGCAGAAAT CCGATCGGTG
CTCACCTGCG AGTCAAAGAT CGGCATCTGT TCAAAATGTT ATGGCACGAA CCTCTCGGTA
CATCAGATCG TTGAAATAGG CGAAGCCGTA GGTGTTATTG CCGCACAGTC GATCGGCGAG
CCTGGTACGC AGTTGACGCT TCGTACCTTC CACCAGGGCG GTACGGCGCA GGGCGGTATA
TCAGAAACCG AGACGAAAGC GTTCTATGAA GGGCAGCTTG AGTTCGAAGA TCTTAAAACC
GTTGAACACA GTGCCATTAC CGAGGATGGC GTTGAGGAGA TTCGAATCAT TGTTGTTCAG
AAAAACGGCA AGATTAATAT TGTTGACCCT GATTCAGGTA AAATCCTGAA GCGCTATGTT
GTTCCTCATG GCGCACATCT GCATTGCAAT GCAAAGGCTC TTGTCAAAAA GGATCAGGTG
CTTTTCAGCA GCGAGCCAAA CAGTACCCAG ATTATTGCCG AATTGCATGG TCGTGTCAAA
TTTGCCGATA TAGAAAAAGG CGTTACCTAT AAGGAAGAGG TTGATCCGCA GACCGGTTTT
GCTCAGCACA CCATTATCAA CTGGCGCTCG AAACTCAGGG CGAACGAGAC TCGGGAGCCA
AGGGTTCTCA TTATCGACGA GAGTGGCGAA GTGAGAAAAA ACTATCCCGT ACCGATCAAG
TCAAATCTCT ATGTCGAGGA TGGTCAGAAG ATTGTACCTG GCGATATCAT TGCCAAAGTA
CCCAGAAACC TTGATCGTGC AGGAGGAGAT ATTACGGCGG GTCTTCCAAA AGTAACCGAA
CTTTTCGAGG CTCGAATTCC TTCGGATCCA GCTATTGTGA GTGAAATTGA TGGTTATGTC
AGTTTTGGTT CACAACGAAG AAGCAGTAAG GAGATCAAGG TTAAAAACGA TTTCGGCGAA
GAGAAAGTAT ACTATGTCCA GGTGGGTAAA CACGTGCTTG CCAACGAGGG TGATGAAGTT
AAGGCTGGCG ATGCGATGAC GGATGGAGCT GTTTCGCCCC AGGACATTCT CCGTATTCAG
GGCCCGAATG CTGTCCAGCA GTATCTTGTG AACGAAATAC AGAAAGTTTA TCAGATAAAT
GCCGGTGTCG AGATCAACGA CAAGCATCTT GAGGTTATTG TTCGCCAGAT GCTGCAGAAA
GTCCGGGTTG AGGAACCGGG CGATACAGAG CTGTTGCCGG GAGACCTCAT CGACAGAAGT
GCGTTTGTTG AAGCAAACAA CAATGTTGCC GAAAAGGTCA GGGTGACAGA AAAAGGCGAT
GCTCCTTCAA GAATTCAGGA GGGACAGCTT TATAAAACGC GGGATATTAC CAAACTGAAC
AGGGAGTTGC GCAAAAACTC GAAAAATCTT GTAGCTTTTG AGCCAGCTCT CCAGGCCACA
TCGCATCCGG TACTGCTCGG CATTACGAGT GCCGCATTGC AGACGGAAAG CGTTATTTCT
GCGGCGTCGT TCCAGGAAAC CACCAAGGTT CTTACCGATG CGGCCGTTGC AGGAAAGATT
GATTATCTGG CGGGTCTCAA AGAGAACGTT ATTGTGGGTA AATTGATCCC TGCGGGTACC
GGGTTGAAGC GGTATCGGAA CCTTACGTTA ACGGGAGAGA GTGTTGAAAC GATCTCTCAT
GACGCATCAG ACGATGCATC AACTCAAAAC GGTATCTGA
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| Protein sequence | MIFSQGASPL KGDFSKIKFS IASPESILAH SRGEVLKPET INYRTFKPER DGLMCEKIFG
PTKDWECYCG KYKRVRYKGI ICDRCGVEVT TKSVRRERMG HISLAVPVVH TWFFRSVPSK
IGALLDLSTK ELERIIYYEV YVVINPGEPG AKQGIKKLDR LTEEQYFQII TEYEDNQDLD
DHDSDKFVAK MGGEAIRLLL KSIDLNETAI HLRKVLKESS SEQKRADALK RLKVVEAFRK
SYEPQKKTRK KAVGLFPEDE LPEPYVFEGN KPEYMVMEVV PVIPPELRPL VPLEGGRFAT
SDLNDLYRRV IIRNNRLKKL IDIRAPEVIL RNEKRMLQEA VDALFDNSRK ANAVKTGESN
RPLKSLSDAL KGKQGRFRQN LLGKRVDYSG RSVIVVGPEL KLHECGLPKS MAIELFQPFV
IRRLVERGIA KSVKSAKKLI DKKDQVVWDV LEKVIDGRPV LLNRAPTLHR LGIQAFQPVL
IEGKAIQIHP LVCTAFNADF DGDQMAVHVP LSQEAQLEAA LLMLSSHNLI LPQSGKPVTV
PSQDMVLGMY YLTKSRPGDP GEGRIFYSDE DVLIAYNEDR IGLHAQIFVH FNGAVDQKFD
PLRVLDTIVD PKSEKYTWLK SQLEKKTILL TTVGRVIFNQ NVPDSIGFIN RVIDKKVAKE
LIGRLSSDVG NVETAKFLDN IKEVGFHYAM KGGLSVGLSD AIVPDTKVRH IKNAQKDSTK
VVKEYNRGTL TDNERYNQIV DVWQKTSNIV AEESYQKLKK DREGFNPLYM MLDSGARGSR
EQVRQLTGMR GLIARPQKSM SGQPGEIIEN PIISNLKEGL TVLEYFISTH GARKGLSDTS
LKTADAGYLT RRLHDVAQDV IVTIEDCGTT RGLHVYRNIE EETSGQIKFR EKIRGRVAAR
DIYDTLNNNV IVKAGEIITE ELGDLIQETA GVEEAEIRSV LTCESKIGIC SKCYGTNLSV
HQIVEIGEAV GVIAAQSIGE PGTQLTLRTF HQGGTAQGGI SETETKAFYE GQLEFEDLKT
VEHSAITEDG VEEIRIIVVQ KNGKINIVDP DSGKILKRYV VPHGAHLHCN AKALVKKDQV
LFSSEPNSTQ IIAELHGRVK FADIEKGVTY KEEVDPQTGF AQHTIINWRS KLRANETREP
RVLIIDESGE VRKNYPVPIK SNLYVEDGQK IVPGDIIAKV PRNLDRAGGD ITAGLPKVTE
LFEARIPSDP AIVSEIDGYV SFGSQRRSSK EIKVKNDFGE EKVYYVQVGK HVLANEGDEV
KAGDAMTDGA VSPQDILRIQ GPNAVQQYLV NEIQKVYQIN AGVEINDKHL EVIVRQMLQK
VRVEEPGDTE LLPGDLIDRS AFVEANNNVA EKVRVTEKGD APSRIQEGQL YKTRDITKLN
RELRKNSKNL VAFEPALQAT SHPVLLGITS AALQTESVIS AASFQETTKV LTDAAVAGKI
DYLAGLKENV IVGKLIPAGT GLKRYRNLTL TGESVETISH DASDDASTQN GI
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