| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0233 |
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| Symbol | rpoB |
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| ID | 4570800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 256527 |
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| End bp | 260465 |
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| Gene Length | 3939 bp |
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| Protein Length | 1312 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639764837 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_910724 |
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| Protein GI | 119356080 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG ATAAAAGCGA GGTGCATGTG AAAGTGGCTG ATGCAACACC AACACCGTGT
ATTGACTTTT CAAAAATTCA GAGTGTTATA GATCCTCCCG ACCTATTAAA AGTTCAGTTA
GATTCATTTC ATAATTTTAT ACAGGATAGT GTTCCGCTTG CCAAAAGAAG AGATCAGGGT
CTGGAGAGAG TGCTTCGCAG TGCATTTCCC ATTACTGATA CTCGCGGACT ATACCTGCTT
GAGTATATAT CCTACAGTTT CGATAAACCG AAATATACGG TTGAGGATTG TATTGAGCGA
GGCCTTACCT ATGATGTTTC GCTGAAAGTC AAGCTTAAGC TTTCCTATAA GGATGAGCCT
GACGAAGCGG ACTGGAAAGA GACAATTCAG CAGGAGGTCT ATCTCGGCAG AATTCCCTAT
ATGACTGAAC GCGGTACGTT TATTGTCAAT GGGGCCGAGC GCGTCGTTGT TGCCCAGTTG
CATCGTTCCC CCGGGGTTGT ATTCAGCGAA GCTATACATC CTAACGGCAA AAAGATGTAT
TCGGCCAAGA TCGTGCCGAC AAGGGGTTCA TGGATCGAGT TTCAGACTGA TATTAATAAT
CAGATATTCG TCTATATCGA CCAGAAGAAA AACTTTCTGG TTACTGCACT TTTGCGCGCT
ATCGGGTTTG CAAAAGATGA AGATATTCTC GGCTTGTTCG ATCTTGTTGA AGAGGTGAAA
ATAACCTCGG CGAAAAAAGA GCAGCTTATA GGGCAGTATC TTGCTTCCGA TATTGTTGAC
ATGCAGACTG GCGAGGTTGT CAGTGCAAGA ACCGCGATTA CCGAAGATAT TGTCGATCAG
ATCATTGCTG CAGGATACAA GAGCGTCCGG GTGATGAAAA GCTTTTCCGG GAACGATAAG
GGGCCGGACA AATCAATTAT TATCAATACT ATTCTCAACG ATAACTCTGC AACCGAAGAA
GAGGCGCTTG AAATAGTATA TGAAGAGCTC CGTGCCAACG AGGCTCCTGA TATCGACGCG
GCAAGAAGTT TTCTTGAACG AACATTTTTT AATCAGAAGA AGTACGATCT TGGCGATGTA
GGACGATACC GGATCCGTAA AAAACTAAGC AAGGAGTTTG AAGAGCTGCA CGGTTATCTT
GACGGGCAGC CCGAGCTTAA AAAACTTTCC GATACTATTT ATGAAAAGAT TCTCCATACG
ATTCAATCTT TTTCAGATGA GCCGATTGGA GGAGATATTC TGGTGCTTAC CCACTATGAT
ATCATTGCTG TTATTTATTA CCTCATAAAA CTTGTAAACG GTCAGGCTGA GGTTGACGAT
GTCGACCATC TTGCAAATCG CCGAGTTCGC TCGGTTGGTG AGCAGCTTGC CGCACAGTTT
GTAATAGGTC TGGCAAGAAT GGGTAAAAAT GTCAGGGAAA AGCTCAATTC AAGAGACTCT
GATAAAATAG CACCTTCGGA TCTTATCAAT GCAAGGACTG TATCAAGCGT CGTATCGAGC
TTTTTTGCTA CAAGTCAGCT ATCGCAGTTC ATGGATCAGA CCAATCCTCT TGCTGAAATG
ACGAACAAGC GGAGGGTTTC TGCTCTTGGA CCTGGAGGGT TGACTCGTGA ACGCGCAGGT
TTTGAAGTAC GCGACGTTCA TTATACGCAC TATGGACGCC TTTGTCCTAT CGAGACACCG
GAAGGTCCCA ATATCGGGCT TATTTCTTCC CTCTCGGTCT ATGCGGAAAT AAACGACAAA
GGATTTATTC AGACGCCATA CAGGGTGGTG ACAAATGGAG TCGTAACCGA CACCGTGCTC
ATGCTGTCGG CTGAAGATGA AGAAAACAAG ATAACGGTTC CGGTCAGTAT TCCGCTTGAT
GAGAATATGA AGATTGCGAT CGAGTCTGTT CAGGCACGAA CGAAAGGCGA TTACCCGCTT
GTTCCGGCTG AAGACGTCAA TTATATGGAT GTTTCGCCAG TACAGATTGT CAGTGCTGCA
GCAGCCCTGA TTCCGTTTCT TGAGCATGAT GACGGAAACC GTGCACTTAT GGGCGCAAAC
ATGCAGCGCC AGGCAGTTCC GCTGCTTACA GCCGAGGCTC CTATAGTCGG AACCGGTATG
GAGTCAAAAG TCGCAAGAGA TTCACGTTCA GTTATTCTTG CCGAAGGCGA TGGCATTGTC
GATGATGTTA CTGCTGAATA TATCAAGGTT CGCTACGATA TTGATGCAGA TACCGATGTT
CGTTTATCGC TGCTTGATCC TGACGAAGGT TTGAAAACCT ACAAGCTGAT CAAGTTCAAA
CGTTCTAACC AGGACACCTG TATTTCCCAG AAACCACTGA TCCATATCGG TCAGCGAGTA
TCGAAAGGAG ATGTTCTTGC AGACAGCTCC TCGACGGAAA ACGGAGAGCT TGCTCTGGGC
AAAAACGTTC TTGTTGCATT CATGCCATGG CGTGGCTATA ACTTTGAAGA CGCTATTATT
CTCAGCGAGC GTCTTGTCTA CGACGATGTT TTCACATCGA TTCATATTCA CGAATTTGAA
GCGAATGTTC GGGATACAAA GCGCGGCGAA GAGCAGTTTA CGCGCGACAT TTACAATGTC
AGCGAAGATG CGCTTAGAAA TCTCGATGAA AACGGCATTG TTCGTATCGG AGCCGAGGTC
AAGGAGAGGG ATATACTTGT CGGGAAAATT ACTCCGAAAG GCGAAAGCGA TCCGACGCCG
GAAGAAAAAT TGCTCCGTGC GATTTTCGGT GATAAATCAA GCGACGTGAA AGACGCCTCA
ATGCATGTTC CCGCAGGAAT GAAGGGGATA GTCATTAAAA CGAAGCTATT CAGCCGCAAG
AAAAAGGTCG GGCTTGATAT CAAGGAAAAA ATAGAGATAC TTGAAAAAAA GTACGACTAC
AAAGAGTACG ACTTGCGGAA GAAATTTTTA AAGAGACTGA AACAACTGCT TGAGGGAAAA
ACTTCAACCG GTATATACAG TGACAAGGGA AAACTGCTTG TAGCTGAGGA CGCGGTGTAT
GATGACAGCG TTCTTGAAAG ATTCACGGCT ATCCCTTTTC TCGAGTCGAT TGATTTTGTC
AAGGGAGTTA CTCAGTCCGA GAAAGTGAAT GAAAATGTGA TGTTGCTTGT CAAGGAGTTC
CGTCTCAAAC TCAAGGATCT GAACGACGAG AGGGACAATG AAAAGTACAA GCTTAACGTT
GGAGACGAAC TTCCTCCCGG AATCGAGGAG CTTGCAAAAG TCTACATTGC CCAGAAGAGA
AAAATCCAGG TGGGTGATAA AATGGCCGGG CGGCATGGTA ACAAGGGTGT TGTAGGCAAA
ATACTTCCTA TCGAGGATAT GCCGTTTATG GAAAACGGTA AACCTGTTGA TATTGTACTT
AATCCCCTTG GCGTACCGAG CCGAATGAAT ATCGGTCAGC TTTACGAAAC ATCGCTTGGC
TGGGCCGGAA AAGAACTTGG TGTCAAATTC AAGACTCCGA TTTTTAATGG CGCAACGTAC
CAGGAAGTAC AGCAGGAGCT TGAAAAGGCA GGGCTTCCTT CCCATGGCAA GGTAAGCTTG
TATGACGGAA GAACCGGCGA GCAGTTTGAT GACGAGGTCA CGATAGGGTA TATCTATATG
CTGAAATTAA GTCATCTGGT TGATGACAAG ATTCATGCCC GTTCGACTGG CCCATACTCG
CTTATAACCC AGCAGCCACT TGGCGGTAAA GCTCAGTTTG GAGGACAGCG GTTTGGTGAA
ATGGAGGTAT GGGCGCTTGA AGCTTACGGC GCGGCCAATA TCCTCAGGGA GATGTTGACA
GTCAAATCCG ATGATGTTAT AGGTCGAAAT AAAACCTATG AGGCTATCGT GAAGGGTCAG
AATCTACCGG AACCGGGAAC GCCGGAGTCA TTTAATGTGC TTGTCAGGGA ACTGCAGGGT
CTCGGTCTTG AAATTCGTAT TGACGACAGG GTTCCTTAG
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| Protein sequence | MQFDKSEVHV KVADATPTPC IDFSKIQSVI DPPDLLKVQL DSFHNFIQDS VPLAKRRDQG
LERVLRSAFP ITDTRGLYLL EYISYSFDKP KYTVEDCIER GLTYDVSLKV KLKLSYKDEP
DEADWKETIQ QEVYLGRIPY MTERGTFIVN GAERVVVAQL HRSPGVVFSE AIHPNGKKMY
SAKIVPTRGS WIEFQTDINN QIFVYIDQKK NFLVTALLRA IGFAKDEDIL GLFDLVEEVK
ITSAKKEQLI GQYLASDIVD MQTGEVVSAR TAITEDIVDQ IIAAGYKSVR VMKSFSGNDK
GPDKSIIINT ILNDNSATEE EALEIVYEEL RANEAPDIDA ARSFLERTFF NQKKYDLGDV
GRYRIRKKLS KEFEELHGYL DGQPELKKLS DTIYEKILHT IQSFSDEPIG GDILVLTHYD
IIAVIYYLIK LVNGQAEVDD VDHLANRRVR SVGEQLAAQF VIGLARMGKN VREKLNSRDS
DKIAPSDLIN ARTVSSVVSS FFATSQLSQF MDQTNPLAEM TNKRRVSALG PGGLTRERAG
FEVRDVHYTH YGRLCPIETP EGPNIGLISS LSVYAEINDK GFIQTPYRVV TNGVVTDTVL
MLSAEDEENK ITVPVSIPLD ENMKIAIESV QARTKGDYPL VPAEDVNYMD VSPVQIVSAA
AALIPFLEHD DGNRALMGAN MQRQAVPLLT AEAPIVGTGM ESKVARDSRS VILAEGDGIV
DDVTAEYIKV RYDIDADTDV RLSLLDPDEG LKTYKLIKFK RSNQDTCISQ KPLIHIGQRV
SKGDVLADSS STENGELALG KNVLVAFMPW RGYNFEDAII LSERLVYDDV FTSIHIHEFE
ANVRDTKRGE EQFTRDIYNV SEDALRNLDE NGIVRIGAEV KERDILVGKI TPKGESDPTP
EEKLLRAIFG DKSSDVKDAS MHVPAGMKGI VIKTKLFSRK KKVGLDIKEK IEILEKKYDY
KEYDLRKKFL KRLKQLLEGK TSTGIYSDKG KLLVAEDAVY DDSVLERFTA IPFLESIDFV
KGVTQSEKVN ENVMLLVKEF RLKLKDLNDE RDNEKYKLNV GDELPPGIEE LAKVYIAQKR
KIQVGDKMAG RHGNKGVVGK ILPIEDMPFM ENGKPVDIVL NPLGVPSRMN IGQLYETSLG
WAGKELGVKF KTPIFNGATY QEVQQELEKA GLPSHGKVSL YDGRTGEQFD DEVTIGYIYM
LKLSHLVDDK IHARSTGPYS LITQQPLGGK AQFGGQRFGE MEVWALEAYG AANILREMLT
VKSDDVIGRN KTYEAIVKGQ NLPEPGTPES FNVLVRELQG LGLEIRIDDR VP
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