| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2173 |
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| Symbol | |
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| ID | 8368634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2588595 |
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| End bp | 2589941 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984627 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003142278 |
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| Protein GI | 256820999 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATTACGAG TGCTTTGTTG TGCCTTAGTG TTATGAGCTT TGCACAACAA
AAAGAATTGA CTTTAAAAGA CGCTATTCGT TATGCTTTAG AGAATAAAGC GGACGCAGAG
AAAGCGCGAT TGGAAGTAAC CAAAAGCGAA TACAAAATAC AAGAAGTACG CGCTAATGCA
CTGCCTAATA TTTCGGCTTC GGGCGGTATG GTGTACAACC CTAAGTTACA AGCTACTTAT
ATTGATGCCA GCACATTTGC TTTCCCGGGT ATGCCCGCAA GTAATGAGCC TATAAAGATG
GAAATGGGGC AAAAATGGTC GGCTAATGCT GAAGCAAAAC TTACCCAAGT GTTGTTTAAT
CAAACGGTGT TTATGGGCTT GAAAGCGGCT CGTACGACAC GTGAGTTTTA TATGCTTAAC
CAACAGCTTA CCGAGAATGA AATCATTGAG AAAGTAGCAC AAGCCTACTA TCAAGTATAC
CAAACCCGAC AAACATTAGA AAATATAGAA AGTAATTTGG CTCTTACCGA GAAAACGGCT
AATGTTGTAA AAGGGTTAAA CCAATCGGGG TTGTCAAAGA AAATAGACGT TGACCGCACT
ACTGTGGCTG TAAATAATCT CAAATCGGCA CGCCAACAAG CCCTTAATGG AGTACAACTC
TCGGAGAATG CGCTCAAATA TATGATAGGT ATGCCGATGA ATGAAGTAAT TACTCTGCCT
AAAGAAGGCT TTGAAGCCAA TTACGATTTG GCTTTTGAGA AAGGCAATAG CAATACTCGT
ATAGAACTAC AAGTACTCGA AAAGCAAAAG CAACTTCTTG ACCTCAATAC CAAAGTACAA
CGTGCAGCAC TTTATCCATC ATTAGCATTG CAGGCTACTT ATGGTTATTT GAGTATGGGA
CCTAAAACAC CGATTATTTA CGGCAAGAAA GATAAAGTGT ACGGAGCTGA CTATTCGGCT
ATTACATTGG GACTTAAAAT ACCTATATTT TCGGGTTTTG GCACACGTGC TAAGATACGC
CAAGCACAGA TAGAAAGTCA AGCGCTTGAA GCGACCCTTA AAGACACCCG TTTGGCAATG
GATTTGGCTT ATGAGAATGC CCACAGTAGG CTTACTAATA ACCTTCTTAC TATTGATTCG
CAAAAGGAGA ATGTAAAGCT TGCAGAAGAG GTATTGCTAA ATACCCAAAA CAACTACCAA
CAAGGTTTGG CTTCCCTTAC GGATTTATTG GAAGCAGAAC GCTCTTTATC GGATGCTAAG
AACAATTATA CCAATGCTTT GTTGGACTAC AAATTAGCAG AAATACAGTT GCTAAAATCA
CAAGGGAAGT TAGAGACAAT GAAGTAA
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| Protein sequence | MKKIITSALL CLSVMSFAQQ KELTLKDAIR YALENKADAE KARLEVTKSE YKIQEVRANA
LPNISASGGM VYNPKLQATY IDASTFAFPG MPASNEPIKM EMGQKWSANA EAKLTQVLFN
QTVFMGLKAA RTTREFYMLN QQLTENEIIE KVAQAYYQVY QTRQTLENIE SNLALTEKTA
NVVKGLNQSG LSKKIDVDRT TVAVNNLKSA RQQALNGVQL SENALKYMIG MPMNEVITLP
KEGFEANYDL AFEKGNSNTR IELQVLEKQK QLLDLNTKVQ RAALYPSLAL QATYGYLSMG
PKTPIIYGKK DKVYGADYSA ITLGLKIPIF SGFGTRAKIR QAQIESQALE ATLKDTRLAM
DLAYENAHSR LTNNLLTIDS QKENVKLAEE VLLNTQNNYQ QGLASLTDLL EAERSLSDAK
NNYTNALLDY KLAEIQLLKS QGKLETMK
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