| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2105 |
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| Symbol | |
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| ID | 8368566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2520800 |
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| End bp | 2523145 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984559 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_003142210 |
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| Protein GI | 256820931 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG AAGATGTTTT AGAAGACTAT GGCATCGCTG TTCTCAGTAG AGAATGTAGC
TTGATGGGAA AGAAAGAAGT GCTTACTGGT AAAGCAAAAT TTGGTATTTT TGGTGATGGG
AAAGAAGTCC CCCAAGTAGC AATGGCGAGA GCCTTTCAGT ATGGAGACTT TCGGAGTGGT
TATTATCGAG ACCAAACCCT TATGATGGCT CTTGGGGTAC ATACAGTTGA AAATTTCTTT
GCTGGACTGT ATGCTCACGC TGATATAAAA GCAGACCCCA CCAGTGCCGG ACGCCAAATG
GGTGGACACT TTGCTACTCA TAGTTTAGAT GAAGAGGGAA ATTGGAAAGA TTTATTAAAA
CAAAAGAATA GTAGTAGCGA TATATCGTGT ACTGCAGGGC AGATGCCTCG TTTATTAGGT
TTAGCGCAAG CCTCTAAAGT ATATCGTGAG TTACCGAATG CTGAAAGTAA AGGCTTCTCA
AATCACGGTA ATGAAGTAGC TTGGGGTACT ATTGGTAATG CAAGCACCAG TGAAGGACAC
TTTTTTGAAA CTCTTAATGC TGCGGGCGTA ATGCAAGTGC CAATGGTAAT TTCGGTTTGG
GACGACGAAT ATGGCATTTC AGTCCCTAAG GAATACCACA CTACCAAAGA AAGTATCTCT
GAAGTGATGA AAGGCTTCCA GCGAGATGCC AACCACAAAG GCTTTGAGAT ATTCGTTGCT
AAAGGTTGGG ATTATCCCAC TTTGTATGAT ATTTATCAAA AAGCAGCTAG AATTGCTCGT
AAAGAGCACG TGCCTGTGTT GGTACACGTA AAAGAACTTA CACAACCCCA AGGGCACTCT
ACCTCAGGCT CTCACGAACG TTATAAAAGT GCTGAACGTT TGCAATGGGA AAAGGATTTC
GACTGTATTA CCAAAATGCG TGAATGGATA TTAGCGAAAG GATATGCTAC TGAAGAGGAA
TTGCAGACAA TAGAAGAAGC AGCTAAAAAG CGTGTACGTG ATGGCAAGAA AAAAGCTTGG
GAAGCGTATA TGAAACCTAT GGAAACAGAA CGCAAGGAAC TTTTACAATT ACTCAATAGC
ATACAACCTA AAACTATCTT TGCTACTGAA CTATCTCAGA TTCCAACTCT TTCTCGTAAG
GTAATAATGA ATGTAGCACG TAAAGCATTG CGACAGTTCT TAAAAGAGAA TAAAGAAGTA
TCGAACTTAC GTACTTGGAT AACTAACTAT ATAGCAACTA ATGAACCTAA GTATAGCAAA
CACTTGTATA CTGAAGGAAC TCATAATGTT ATGAAAATAG CAGAAGTAGC TCCTATATAT
GAACCAGATG CTAAACTTGT TGATGCAAGA CTGATCTTAC GTGAGAACTT TGATGCATTA
CTTACCAAGT ATCCTAACCT TTTGATATTT GGCGAAGATG TAGGTAATAT AGGCGATGTA
AACCAAGGTT TGGAAGGTTT ACAAAAGAAA CACGGAGCTA TAAAAGTAGC TGATACAGGT
ATTCGTGAAT CGACTATCGT AGGACAAGGA ATAGGCTTGG CTATGCGTGG TTTACGTCCT
ATTGCCGAAA TTCAGTACTT AGATTATATT CTCTATGGGC TACAGACCCT CAGTGACGAT
TTAGCAACCT TACATTATCG TACCTTTGGT CGTCAGTTGG CACCGCTCAT TGTGCGCACA
CGTGGGCATC GTTTGGAAGG AATATGGCAT GCTGGTTCTC CTATGGGGGT ATTGTTGCAC
TCTCTTCGTG GGGTTTGTAT TCTTACTCCT CGTAATATGG TGAAGGCAGC AGGATTCTAC
AATACACTCT TAGAAGGTAA TCAACCTGCG GTAGTGGTGG AATGTCTTAA TGGTTACCGT
CTGAAAGAAC CAATGCCTAC GAATCTCACC GAGTTCAAAA CGCCTATTGG AGTAGTCGAA
ACACTTCGTG AAGGAAAAGA TATTACAGTC GTATCTTATG GCTCTACTTT GCGCATCGTA
TGTGAAGTTG CCGATGAGTT AGCCTCTATG GGTATTGATA TAGAGATTAT AGATGCACAA
TCCTTAGCAC CATTCGATGT GCGTCATGAT ATAGTGAAGA GTATACAGAA AACCAATCGA
CTATTAGTAG TAGACGAAGA TATGCCTGGA GCTACTTCGG CATATATTTT GCAGAAGATA
GTAGAAGAAC AAAATGCTTA TCAGTATTTG GACAGTGCGC CACAAACCTT AGCAGCAGGA
GAACATCGTC CAGCGTATGC TACTGATGGT GATTACTTTT CTAAACCTAA TGCCGATAGC
ATTATTGAGA AGATATACAG TATAATGCAC GAAGCTAATC CTGAAAAATA TCCAACCTTG
CTATAA
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| Protein sequence | MKKEDVLEDY GIAVLSRECS LMGKKEVLTG KAKFGIFGDG KEVPQVAMAR AFQYGDFRSG
YYRDQTLMMA LGVHTVENFF AGLYAHADIK ADPTSAGRQM GGHFATHSLD EEGNWKDLLK
QKNSSSDISC TAGQMPRLLG LAQASKVYRE LPNAESKGFS NHGNEVAWGT IGNASTSEGH
FFETLNAAGV MQVPMVISVW DDEYGISVPK EYHTTKESIS EVMKGFQRDA NHKGFEIFVA
KGWDYPTLYD IYQKAARIAR KEHVPVLVHV KELTQPQGHS TSGSHERYKS AERLQWEKDF
DCITKMREWI LAKGYATEEE LQTIEEAAKK RVRDGKKKAW EAYMKPMETE RKELLQLLNS
IQPKTIFATE LSQIPTLSRK VIMNVARKAL RQFLKENKEV SNLRTWITNY IATNEPKYSK
HLYTEGTHNV MKIAEVAPIY EPDAKLVDAR LILRENFDAL LTKYPNLLIF GEDVGNIGDV
NQGLEGLQKK HGAIKVADTG IRESTIVGQG IGLAMRGLRP IAEIQYLDYI LYGLQTLSDD
LATLHYRTFG RQLAPLIVRT RGHRLEGIWH AGSPMGVLLH SLRGVCILTP RNMVKAAGFY
NTLLEGNQPA VVVECLNGYR LKEPMPTNLT EFKTPIGVVE TLREGKDITV VSYGSTLRIV
CEVADELASM GIDIEIIDAQ SLAPFDVRHD IVKSIQKTNR LLVVDEDMPG ATSAYILQKI
VEEQNAYQYL DSAPQTLAAG EHRPAYATDG DYFSKPNADS IIEKIYSIMH EANPEKYPTL
L
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