Gene Coch_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2088 
Symbol 
ID8368549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2502271 
End bp2503221 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content42% 
IMG OID644984542 
ProductElectron transfer flavoprotein alpha subunit 
Protein accessionYP_003142193 
Protein GI256820914 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAC TCATATATAT AGATTCCGAA AACGGAAAAG TAAAGAAAAG TAGTTATGAA 
GTGGCTACTT ATGCCAAAAC TCTTGCTCAG AAACAAAATA CCAAAATAGT AGCAGTAGCT
ATCAACATTG ATAATCCTGA AATGTTAGGC ACTTATGGTA TTGATAAAGT ATTGAACGTA
GCCGATGAAA AGCTACAACA CTTTTCGGCG AAGGCTGTAG CACAAATATT ACAACAGGCA
GTGAAGAAAG AAGGGAGTAC AACGGTGCTT TTCAGCGCCT CGTCGCAAGC CAAGAATATT
GCCCCTTTAT TAGCCACTTC TTTACAAGCA GGTTATGTAC CTAACGCCAT TTCACTCCCT
GAAAACGATT TTACTATTAA AAGTAATGCC TTTTCTAACA AAGCCGTAAG TTTAAACAAA
ATCACAACAG CTATAAAAAT AGTAGGATTA GCTCCTAATG CCTTCGGAGT AAAAGAAAAT
CCTACTCCGG CAATTGTAGA ACCCTTCTCC CCTACCCTTT CAGATAGTGA TTTCGATATA
AAGATAATCG CTACCGAGAA GGCTACAGGC AAAGTACCGT TAGACGATGC CTCTATTGTG
GTATCAGGAG GACGCGGACT AAGAGCCGCC GAGAATTGGC ACATAATCGA AGATCTTGCC
GAAGTACTCG GCGCTGCCAC CGCTTGTTCT AAGCCTGTGG CTGATATGGG GTGGCGTCCA
CACGCTGAGC ACGTAGGACA AACAGGAAAA CCCGTTGCGC CTAACTTGTA TATTGCCATT
GGCATTTCAG GAGCTATACA ACACTTGGCG GGGGTTAATG CCTCAAAAGT AAAGCTGGTT
ATCAACACCG ATGCCGAGGC TCCTTTCTTT AAAGCTGCCG ATTACGGCGT GGTAGGCGAT
GCTTTTGAAG TTGTTCCCAA GCTTATAGAA AAACTAAAAG CTAAACTTTA A
 
Protein sequence
MSILIYIDSE NGKVKKSSYE VATYAKTLAQ KQNTKIVAVA INIDNPEMLG TYGIDKVLNV 
ADEKLQHFSA KAVAQILQQA VKKEGSTTVL FSASSQAKNI APLLATSLQA GYVPNAISLP
ENDFTIKSNA FSNKAVSLNK ITTAIKIVGL APNAFGVKEN PTPAIVEPFS PTLSDSDFDI
KIIATEKATG KVPLDDASIV VSGGRGLRAA ENWHIIEDLA EVLGAATACS KPVADMGWRP
HAEHVGQTGK PVAPNLYIAI GISGAIQHLA GVNASKVKLV INTDAEAPFF KAADYGVVGD
AFEVVPKLIE KLKAKL