| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2080 |
|---|
| Symbol | |
|---|
| ID | 8368541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 2494732 |
|---|
| End bp | 2495610 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 644984534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142185 |
|---|
| Protein GI | 256820906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTATC ATATTATAAA TATTACAGAA AAAGGCTTTT TTCATCACTT CTTTGAAGAT
GAAACTGAAT TACTTTCTTC AGAGATAACA ATTACTGAAA ATTCTATTAT TTATCAAGGA
GATCCTACAA ATATTCCCAT AAAGCTAAAA GAATCAAAAT TTAAAAATTA TTCTCAATCT
TGGTTTATTG CAGGCCTAAG AGCTCAAGAA CTTTTTAAAA ATCAAGGTAA AGAAAATGGG
CTTATTTTAG AACAAATATC CCAGGATCAA AAAAGTTTTG AGCAATATAT AATTTCTAAA
ATACCATTTG AAGCAATTAA AAGAGGGGAT TTTCTAGTTA GAAATTATGG TAATATTGAG
ATAGAAGTAA AATGCAAAAC TTTTTATAAA AAAAATAATC AAGATGTTTT CTATTTTAAT
TGTAACGAAT TTGAAAAGCA TTTCAATATG CAAAAAATAA TAAATTCTCC TGTTATAATC
GCAATTTATA AAAGAGAAAA TAACATTTTG AAAGAAGATA ACCCTTATTT TATTTCTATA
AATGAGATCT ATAGAAACAT AGGTTTATTA AAAAAAGAAG AAAATAAAGA GATAAATACA
GGTGAAAGCT ATCTAATTCC TCTTAGCCTC ACTGTTCAAA GTTTTGATTA CATAAAAAAT
TTTGACAAAT ACAATGAAAA GTCCTATTCT GTTGAAAAAA TAAGGGAAGC CCATCCTAAT
GCTTATGCTA AATGGGCAAA AGAAGATGAT GATAAGTTAG AGTTACTCTA TTGTGAAAAG
ACAACAGTAA AAGAATTGTG TGACATCTTT GGAAGAAATA GGGGAGCTAT TTTATCCCGA
ATAAAAAAAT TAGAACTAAG AGAAAAATAT GATATATAG
|
|---|
| Protein sequence | MGYHIINITE KGFFHHFFED ETELLSSEIT ITENSIIYQG DPTNIPIKLK ESKFKNYSQS
WFIAGLRAQE LFKNQGKENG LILEQISQDQ KSFEQYIISK IPFEAIKRGD FLVRNYGNIE
IEVKCKTFYK KNNQDVFYFN CNEFEKHFNM QKIINSPVII AIYKRENNIL KEDNPYFISI
NEIYRNIGLL KKEENKEINT GESYLIPLSL TVQSFDYIKN FDKYNEKSYS VEKIREAHPN
AYAKWAKEDD DKLELLYCEK TTVKELCDIF GRNRGAILSR IKKLELREKY DI
|
|---|
| |