| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2040 |
|---|
| Symbol | |
|---|
| ID | 8368501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2445105 |
|---|
| End bp | 2446034 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644984494 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003142145 |
|---|
| Protein GI | 256820866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4152] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAA TAGAAAATAT TAGTAAACAA TACGGCGACT ATACGGCTTT AGACGATGTG
TCGTTACATA TCCCTAAGGG GAGTATCTTT GGTCTGCTGG GACCTAATGG GGCGGGAAAA
ACCTCACTGA TACGTATTAT CAACCAAATT GTATTGCCCG ATGCGGGTAA AGTGTTCTTC
GACGGAGAAC TGTTACAACC TAAGCATACG GCACAAATAG GCTATTTACC CGAAGAGCGT
GGTTTGTACA AAACGATGAA GGTAGGTGAG CAGGCTTTGT ATTTAGCACA ACTGAAAGGA
TTGAGCAAGG AAGAAGCTAA GGAGCGACTT AAATTTTGGT TCAACCGCCT TGATATTGGT
GATTGGTGGC ACAAAAAAGT ACAAGAGCTC TCCAAAGGTA TGGCACAGAA AATTCAATTT
TTGGTAACTG TACTTCACAA CCCTAAACTG TTGATATTCG ACGAGCCTTT TAGCGGTTTC
GACCCCATCA ATGCGAATAT TATCAAGGAC GAAATTCTAT ACTTACGGGA GCAAGGAGCA
ACGATTATCT TCTCTACTCA CCGAATGGAA TCGGTTGAAG AGTTGTGCGA CCATATTGCG
CTAATCAATA AATCGCGTAA GATATTAGAT GGTAAACTCA TCGACATTAA GAGGGCTTAT
AAAAACAACT TGTATGAAGT AGGTTTAAAA GTTGCTGAAG AGCAGAAAAC AGCCCTCTTA
GCTGAACTTA AAAGCCAATT TGAAGTGAGT GAGACAAATT TTAAAACGCT ATATGACGAG
TTAAAATTAC ATATCCAGAA GAAAGAGGGA CAAACGGCTA ACGATTTGTT GCAATACCTC
ACTACACGTG CCGAAGTAAC GCACTTTGTA GAATCTATCC CCTCAGTAGA TGAGATTTTT
ATATCGACCA TTAATAAATT GAAAGAATAG
|
|---|
| Protein sequence | MLRIENISKQ YGDYTALDDV SLHIPKGSIF GLLGPNGAGK TSLIRIINQI VLPDAGKVFF
DGELLQPKHT AQIGYLPEER GLYKTMKVGE QALYLAQLKG LSKEEAKERL KFWFNRLDIG
DWWHKKVQEL SKGMAQKIQF LVTVLHNPKL LIFDEPFSGF DPINANIIKD EILYLREQGA
TIIFSTHRME SVEELCDHIA LINKSRKILD GKLIDIKRAY KNNLYEVGLK VAEEQKTALL
AELKSQFEVS ETNFKTLYDE LKLHIQKKEG QTANDLLQYL TTRAEVTHFV ESIPSVDEIF
ISTINKLKE
|
|---|
| |