Gene Coch_2011 details

Gene Information

• Locus tag: Coch_2011
• ID: 8368472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2402381
• End bp: 2402983
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 644984465
• Product: thioredoxin-like protein
• Protein accession: YP_003142116
• Protein GI: 256820837

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.113065
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACAA CGCAAATCAT TCGCAATAGC CTCCTAAAAG CTGTTTCTTA CGAGACCTAT 
CGCAACCTGA TAGACAAGTA TGCAACAGAA GGAAAATCGA GCGGAGAAGA ACAAACCGAA 
GAACGCATAT ATTACACTGC TTTAAACCAA AAACGCTACA AACGCTTAGA TAAAACCATA 
GAAATACCTG AAGATAAGGC TCAATTCTTT GTAAACTACC CTAAGAGTGT TTGTTTATTA 
GTGATTATCG AAAGTTGGTG TGCTGATGCG GCTCAAATTG TACCCGTAGT ACATAAAATA 
GCGACCCTCA ACCCTAAAAT CACTATGAAA CTTGTTTTTA GAGATGAGAA TGAAGAGCTG 
ATGAATCTTT TTCTTACCAA TGGAGGCAAA GCCATTCCTG TAGTAGTGTT TTTAGACTTA 
GAAGATAAGG TGTTAGCACA TTGGGGCTCT CGTCCGTCAG TAGCTACTAA AATGGTAGAA 
GAAGAGAAGG CTAAGAATGG TAAACTCACC CCTGAATTCA AAGAAGAACT ACAAAAATGG 
TACAACCAGG ACAAAGGAGC CACCATTGTA GACGATTTTA TGAAGATAAT GAAAACATTG 
TAA 

 

Protein sequence

MDTTQIIRNS LLKAVSYETY RNLIDKYATE GKSSGEEQTE ERIYYTALNQ KRYKRLDKTI 
EIPEDKAQFF VNYPKSVCLL VIIESWCADA AQIVPVVHKI ATLNPKITMK LVFRDENEEL 
MNLFLTNGGK AIPVVVFLDL EDKVLAHWGS RPSVATKMVE EEKAKNGKLT PEFKEELQKW 
YNQDKGATIV DDFMKIMKTL