| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2010 |
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| Symbol | clpX |
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| ID | 8368471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2401085 |
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| End bp | 2402317 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984464 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_003142115 |
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| Protein GI | 256820836 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0987995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA AAGAAGTAGA ATATTGTTCA TTCTGCGGTC GTGCAGAACC CGAAACCGAG
ATGCTAATTC GCGGTATGGC TGGTAATATA TGCAACTATT GCGTTGAACA AGCTAATATC
ATTATAGAAG AGGCATTCGG TACTAAAGCT CAAAAAGGGA AGCCTGTAGT ATCGGGTGAT
ATGACCCTGA AAACCCCACA AGAGATTAAA AAATTCCTCG ACCAGTATGT AATAGGTCAG
GACTTTACTA AAAAAATACT CTCGGTGGCA GTATACAATC ACTACAAGCG TTTGCAACAA
CCCGATGCCG ACGATGAAGT GGAAATACAA AAGAGTAACG TGATAATGGT AGGTGAAACG
GGTACAGGTA AAACCTTAGT AGCACGCACA ATTGCTAAGA TGCTAAATGT GCCTATTGCC
ATTGTAGACG CTACAGTACT GACTGAGGCT GGCTATGTAG GTGAAGATGT GGAGAGTATT
CTCTCACGCC TGTTACAAGC TGCTGACTAC GATGTGGAAA AAGCTGAAAG AGGCATCGTG
TTCATAGACG AAATCGACAA GATTGCTCGC AAGAGCGACA ATCCCTCTAT CACTCGTGAC
GTATCGGGCG AAGGGGTACA GCAAGCACTG CTAAAACTCC TCGAAGGCTC TGTGGTGAAC
GTACCTCCCA AGGGCGGACG CAAGCACCCC GATCAGAAGT ATATAGAAGT AAACACCGAA
CACATCTTGT TTATTGCCGG AGGAGCTTTC GACGGCATTG AGCGTGTTAT TTCTAAACGC
CTGAATATGC AAGCAGTGGG TTACAATTCG TCTAAAAATA CACAAGTAGA TAGGAAAAAC
TTGGTACAAT ACATCATACC CAAAGACCTA AAAGACTTCG GTTTGATACC CGAGATTATA
GGTCGCTTGC CGGTGCTTAC CTATATGAAT CCATTAGATA AACACACTTT GCGTATGATT
CTTACCGAAC CTAAGAATGC TATCATCAAA CAGTATAAAA AACTCTTTGA GATGGATGGC
ATTAAATTTG ATATAACAGA AGAAGCGCTC GACTTTATCG TTGAGAAAGC CTTAGAGTAT
AAACTCGGCG CACGTGGTTT GCGTTCGCTA TGCGAGAATA TACTCACTGA TGCGATGTTT
GAGCTTCCTA ATTCAGGCGT AAAAGAACTG ACAATAACCA AAGAATACGC TGAGGAAAAA
CTCAACAAAT CAGCTTTGCA AATAGCTTCT TAA
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| Protein sequence | MAKKEVEYCS FCGRAEPETE MLIRGMAGNI CNYCVEQANI IIEEAFGTKA QKGKPVVSGD
MTLKTPQEIK KFLDQYVIGQ DFTKKILSVA VYNHYKRLQQ PDADDEVEIQ KSNVIMVGET
GTGKTLVART IAKMLNVPIA IVDATVLTEA GYVGEDVESI LSRLLQAADY DVEKAERGIV
FIDEIDKIAR KSDNPSITRD VSGEGVQQAL LKLLEGSVVN VPPKGGRKHP DQKYIEVNTE
HILFIAGGAF DGIERVISKR LNMQAVGYNS SKNTQVDRKN LVQYIIPKDL KDFGLIPEII
GRLPVLTYMN PLDKHTLRMI LTEPKNAIIK QYKKLFEMDG IKFDITEEAL DFIVEKALEY
KLGARGLRSL CENILTDAMF ELPNSGVKEL TITKEYAEEK LNKSALQIAS
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