| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2009 |
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| Symbol | |
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| ID | 8368470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2400426 |
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| End bp | 2401085 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984463 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_003142114 |
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| Protein GI | 256820835 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0464642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATTTAT CAGACGAATT TAGAAAATAT GCTACTAAAC AGCACGGTGT AAATAGCCTT
TACTACGATA AGATTATCGG CAGTATGACC CCTTACATTA TGGAGGAACG CCAGCTGAAT
GTAGCCCAAA TGGACGTATT TTCGCGCTTG ATGATGGATA GAATCATCTT CTTGGGCACC
GATGTAAATG ACCAAGTAGC GAATATTGTT ACTGCGCAAT TGCTTTTCTT GGAAAGTGTA
GATAGCGCTA AAGATATTCA AATCTATATC AATTCGCCAG GAGGTAGCGT GTATGCCGGC
TTAGGTATTT ACGATACGAT GCAGTTTATA AAACCTGATG TGGCTACTAT CTGCACCGGT
ATTGCTGCTT CGATGGCTGC CGTATTGCTA TGTGCTGGAA CTGAGGGCAA ACGTTCAGCT
TTACCACACT CTCGTGTGAT GATTCACCAA CCTTCGGGAG GTGCACAAGG GGTAGCCAGC
GATATGGAAA TAAATCTAAA AGAAATGTTG AAACTCAAAA ACGAACTCTA CGAAATCATT
GCCAAACACT CTAAGCAACC TTTTGCTAAA GTGTATAAAG ACTCAGAACG CGACTACTGG
ATGATAGCAC GCGAAGCTAA AGAGTATGGT ATGATAGACG AAGTGTTAGA AAGAAAATAA
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| Protein sequence | MNLSDEFRKY ATKQHGVNSL YYDKIIGSMT PYIMEERQLN VAQMDVFSRL MMDRIIFLGT
DVNDQVANIV TAQLLFLESV DSAKDIQIYI NSPGGSVYAG LGIYDTMQFI KPDVATICTG
IAASMAAVLL CAGTEGKRSA LPHSRVMIHQ PSGGAQGVAS DMEINLKEML KLKNELYEII
AKHSKQPFAK VYKDSERDYW MIAREAKEYG MIDEVLERK
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