| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1993 |
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| Symbol | prmA |
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| ID | 8368454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2386074 |
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| End bp | 2386910 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984447 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_003142098 |
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| Protein GI | 256820819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACA TAGAATACAC TTTTACCATT GCCCCTATGG GGGTTGCTTC TGAAATATTA
GTTGCCGAAC TTGCCGAAGT AGGCTTCGAG AGCTTTGTAG ATACCGAAAC CGGTTTGCAG
GCTTATATAC AAGAACCCTT TTGGAATGCT GATATACTCT CTGACATACA GATACTTCAC
AGTGAGGAGT TCCAAATTAC CTACACACAT CAAACTATTG AACAGGTGAA TTGGAATGAG
GAATGGGAAA AACACTTCGA GCCTATCACC GTAGACGATG AGTGTACCGT ACGTGCTACC
TTTCACCCCG AAGCACATAC CCCTTATGAA ATTGTTATCG ACCCTAAGAT GAGTTTCGGT
ACTGGTCATC ACGAAACTAC TTATATGATG TTGCAATTCC TTTTAAAGGA AGAACTCAAA
GGCAAAAAGG TACTCGATAT GGGTTGTGGC ACAAGCGTAC TCGCTATTAT GGCAGCCAAA
CGCGGTGCTA CTGAGGTACT CGCCATTGAT GTAGACGAAT GGTGTGTAGA GAACTCCATT
GAAAACGTAG AACGCAATGG TTGTAAGCAC ATCAAAGTAC AGTTGGGAGA TGCTTCTTCA
CTGGCTAATG AAAAAGACTT CGACCTTATT ATTGCGAATA TCAACCGTAA TATTCTCTTA
AACGATATAC CGCAGTATGT ACCAGTTCTC AAAGCAGGAG GCTCTCTCTT GCTCAGTGGT
TTTTACAAGG AAGAAATACC TCTTATCCGC GAAAAAGCAG AAGCATACGG TTTGCAATAC
ATCGAGAACT TAGAACGCAA CAACTGGGTA GCAGTAAAAT TCAAAAAACA AGCCTAA
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| Protein sequence | MNYIEYTFTI APMGVASEIL VAELAEVGFE SFVDTETGLQ AYIQEPFWNA DILSDIQILH
SEEFQITYTH QTIEQVNWNE EWEKHFEPIT VDDECTVRAT FHPEAHTPYE IVIDPKMSFG
TGHHETTYMM LQFLLKEELK GKKVLDMGCG TSVLAIMAAK RGATEVLAID VDEWCVENSI
ENVERNGCKH IKVQLGDASS LANEKDFDLI IANINRNILL NDIPQYVPVL KAGGSLLLSG
FYKEEIPLIR EKAEAYGLQY IENLERNNWV AVKFKKQA
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