Gene Coch_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1890 
Symbol 
ID8368345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2268753 
End bp2270291 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content37% 
IMG OID644984339 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_003141996 
Protein GI256820717 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAA AAATTTACGG AAGTGCTGTA TTTGGTGTAG AAGCCAGCAC AATTACTATT 
GAAGTAAATA TCGATAAAGG TATTGGCTAT CATTTGGTTG GATTACCCGA TATAGCTATT
AAAGAAAGTA ATTATCGTAT AGCAGCTGCT CTGCAAAACA ATGGATATAA AATTCCAGGT
AAAAAGATAA CCATCAATAT GGCTCCTGCC GATATGCGTA AGGAAGGTTC TGCCTATGAT
TTAAGTTTTG CAATTGGTAT TTTAGCAGCT AACGGGCAAA TACAAAGTGA AGAATTAGAA
AAATATATCA TTATGGGAGA ACTATCCTTA GATGGCAGTT TGCAACCCAT TAAAGGAGCA
CTACCCATTG CTATTCAAGC ACGCAAAGAA GGATTCAAAG GATTTATTCT TCCTAAGCAA
AATGCTAAAG AAGCTGCTAT AGTAGATAAT TTGGACGTTT ATGGTGTAGA AAATATAAAA
GAAGTCATAG ATTTTTTTAA TGGAGAAAAA GAATTACAAC CTATCGAAAT AGATACACGC
AAAGAGTTTT ACAGAGATTT AGAATCTCCT GAATTTGACT TTGCAGATGT AAAAGGTCAA
GAAACTGTAA AACGTTGTAT GGAAATAGCT GCTGCTGGTG GACATAATGT TATTTTAATA
GGCCCTCCTG GTTCAGGAAA AACAATGCTC GCTAAGCGTT TACCTAGCAT TCTTCCTCCG
ATGACACTTC ACGAAGCTCT TGAAACTACT AAAATACACA GTGTAGTAGG ACGTATTAGG
GACACAGGCT TAATGAGCCA TCGTCCTTTC CGTAGTCCTC ATCACACTAT TTCTGACGTA
GCTCTCGTAG GAGGAGGTAC TTACCCTCAA CCAGGTGAAA TATCTCTCGC ACATAATGGA
GTACTTTTTC TTGATGAGTT ACCAGAGTTC AAAAGAGCTG TTCTCGAGGT AATGCGACAA
CCTTTAGAAG ATAGAGAAGT TACTATTTCT AGAGCAAAGT TTTCAGTTAC TTACCCCGCT
TCATTTATGT TAGTAGCAAG TATGAATCCA AGTCCAAGCG GGTATTTTAA CGACCCCGAT
GCTCCTGTTA CTTCTACACC TGCTGAAATG CAACGCTATT TAAGTAAAAT TTCAGGACCT
CTATTAGATA GAATAGATAT TCATATAGAA GTAAATCCTG TACCCTTTGA AAAACTTTCA
GATGATAGAA AAGGTGAAAG TAGTCGTGAT ATCCGTAAAC GGGTGATAGA TGCTCGAAAT
ATCCAAACAG AACGTTTCAA AGAATATGAA CATATTCACT ATAACGCTCA AATGAATACT
AAACAAATAC AGAAATTTTG TAAAGTAAAT ACGGATTCTT TAACCCTACT AAAAGATGCT
ATGACGCGTC TCAACCTTTC TGCACGTGCC TATGACCGTA TTTTAAAAGT AGCGCGTACA
ATAGCCGATT TAGAAAAGTC AGAAGAAGTA CAACCTCATC ATATAGGCGA AGCTATTCAA
TATCGTAGTT TAGACCGTGA AGGTTGGTTT GGAGGATAA
 
Protein sequence
MLVKIYGSAV FGVEASTITI EVNIDKGIGY HLVGLPDIAI KESNYRIAAA LQNNGYKIPG 
KKITINMAPA DMRKEGSAYD LSFAIGILAA NGQIQSEELE KYIIMGELSL DGSLQPIKGA
LPIAIQARKE GFKGFILPKQ NAKEAAIVDN LDVYGVENIK EVIDFFNGEK ELQPIEIDTR
KEFYRDLESP EFDFADVKGQ ETVKRCMEIA AAGGHNVILI GPPGSGKTML AKRLPSILPP
MTLHEALETT KIHSVVGRIR DTGLMSHRPF RSPHHTISDV ALVGGGTYPQ PGEISLAHNG
VLFLDELPEF KRAVLEVMRQ PLEDREVTIS RAKFSVTYPA SFMLVASMNP SPSGYFNDPD
APVTSTPAEM QRYLSKISGP LLDRIDIHIE VNPVPFEKLS DDRKGESSRD IRKRVIDARN
IQTERFKEYE HIHYNAQMNT KQIQKFCKVN TDSLTLLKDA MTRLNLSARA YDRILKVART
IADLEKSEEV QPHHIGEAIQ YRSLDREGWF GG