| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1820 |
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| Symbol | |
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| ID | 8368268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2171701 |
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| End bp | 2174334 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984262 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141926 |
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| Protein GI | 256820647 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG AAAAGAAATA TACACAACCA TTAGGATACC AAAGGTTCAT CTCTTTGGTA
CTCATTGCTT TTCCTTTTTT TTGCTCAGCT CTTTACGCTC AAACTGCAAC TCTCACCACT
GTTTCTCCTA CTACTATTTC TGACACTACA CAGCCTATTC AGTTAGAAGA AGTGGTAGTA
ACTGCCAAAG AACTTCCTGC TCCTACCTCT ACTTCGCTTA TCGACCGCAA GGCTATGCAA
CACCTCCAGC CTTCCAGCTT TGCCGATTTG GTGAGTTTGC TCCCTGGTCG GCAAGTTACG
ACTCCCTCAT TAAATTATGC TAATACGCTC ACTATCAGGC AGACAGGAAC GCCTATGGAC
GGCTATAGGA TTTCCTCTTT AGGCGTAGGC TTCAATATCG ATGGTGTTCC CTTAGATGTG
AATAACAATA TGCAATCTAC GGTAGGTACC GGAATGGTTA TCACCCCTCA ATCGAATTAC
GCCGATGAGA AGCGCAACAC TACCCGCTCA GGAGTAGATA TGCGCACCAT TGCTACCGAT
GATATTGAAA CAGTGGAGAT TATACGCGGT ATTCCATCGG TAAAATTTGG TGACATCAGC
AGTGGAATAG TAACAATTCA CCGCAAAAAA GGCTATACTC CCCTTAGGGC GCGAGCCAAA
GCCGATGGTT TTAGCAAACT TTTCTATGTA GGCAAAGGCT TTGAACTTAC TGAAAATCGC
CTCAAACTCA ACTTCAGTTT GGATTATTTA GATTCCCAAC CCGACCCGCG TAACAGCTTT
GAAAACTACA AACGTTACAC TGCTTCGGCT CGTGCCGAAA AACACTTTAA TACCGAAAAT
CCGCTTACGT GGAATTTCAG CATCGACTAT ACGGGCACTA TCGACAAGGA AAAACGCGAC
CCCGATGTAG GTTTTGATCG CTATGATGCT TATCAATCCA TTTACAACAA TATCCGTATC
GCCAATGGGC TGAGTTGGGA ACTCCACAAA ACATTCTTCA AAACATTGGT ACTCAAAACT
AGTTACTCGC AGAGTTTTGA CCGTATTGAA CAAGACAAAT GGGTGCAAAT CACCAATGCG
CGCCCTGTCT TCACAAACAC AGAAGCAGGT GAATTTTATG GCGCATTTTC CGACCCTAAC
TATGTGTCGC ACTTGCTCGT AGATGGCAAA CCGCTACACC TTTATACCGA CTTTGCAGCA
GGAGGTTATA AACGTTTTGC AGGATTTCTT AACGAGTTTC TTATAGGGCT TACTTACAAC
TACAACAAAA ACAACGGTCT GGGTCAGGTA TACGATTTGG CGCACCCACC TTCACCCGAA
ATAACTACAC GTCCGCGTGC TTTCAAGAGT ATTCCCGCGA TGCAGGATAT GTCTTTTTAT
GTTGAAGAAC AGTTAGAAAA AACCTTTTGG CATACCGATT TCTTCTTGCG TGCCGGTTTG
CGCGCCAACA CCCTTTTAGG ACTTGATTCA CGCTACGCAT TGCATAACAA GGTGTGTTTC
GACCCACGTG TGAATATGAA AGTTACTTTT CCTAAAATTG AATTTGCTAA CCAAAAAGCT
CTCATTATCA GTCTTACAGG TGGTTGGGGC AAGCACAGCA AACTCCCTAC TCAAGAGATG
CTCTACCCTC AAGAAAAATA CGAAGATTTT GTTCAGCTAA ATTACTATCA CAGCCAAAGG
GCTTACCGCC AATTGCACTA TAAAACGTAT ATTTTTCCGC AAGTGAACTA CAGCATTATG
CCCGCAGTGA ACAGCAAAGC CGAAGTGCGC CTTGGCTTGG AATACGACCA CCATTCGCTG
TTTATCACCT ATTTCGACGA GCGTATGCAA TCGGGTTTCC GAAAGATGAG CGATTATCAC
AAGGTATTCT ATAAAAAATA CGATGCTACA GGGCTCAATC ACAATGCGAT TACTGCCCCT
CCTTTGGTGG AAAACCTGCC CTATACTGTG CAAGACGCCC TGATACTCTC AGATATGGAG
AGCAATGGCT CAGCTATCGA TAAACAAGGG ATGGAATTTC AGTACAGTAG CAAGCGCCTA
CAATTGCTCA ACACTCGCTT TACCCTTAGT GGTGCGTGGT TTCACAGCTT GTATTACAAC
TCATTGCCTG TATATCGTCC TGCCGATAAA GATATCATTA ACAACCGCAA ATATTACAAT
CTGGGAGTAT ATCCTGAAAT GGAGAAGTAC GACTGTGAAC AGTTACAAAC CAGTCTCGTA
GCCGATACTT ACCTCCCTGA ACTGCATCTC ATCACCTCTG TGCGTTGCGA CCTCACTTGG
TATGTTATCA ACAGCAGTCC ATCTCTTAGT CGTGTGCCCA CTCACTACAT CAGTGAAGAT
GGTGTGCGTC ACCCATATAC AGCGACAGAA GCGAGTGACC CCGTATTGCA ATGGCTCATA
CGCCCTACAA CTATAAGTCT CAGTGATAGA ACCCCATTAT CAATGAACAT ACATCTAAAA
ATATCAAAAG AATTTTATAA ATATTTTACC CTTTCGATAT ATGTAAACAA TCTGTTCAAC
TTTTACGAGG ACTACCGTGT GAACAGACAA TACATCAACC GTCGCGGACT TATCAACCCC
TATTTTGGAA TGGAGATGAA CATTTCTTTA GGGAAGAGTA AATTAGCAAA TTAA
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| Protein sequence | MKSEKKYTQP LGYQRFISLV LIAFPFFCSA LYAQTATLTT VSPTTISDTT QPIQLEEVVV
TAKELPAPTS TSLIDRKAMQ HLQPSSFADL VSLLPGRQVT TPSLNYANTL TIRQTGTPMD
GYRISSLGVG FNIDGVPLDV NNNMQSTVGT GMVITPQSNY ADEKRNTTRS GVDMRTIATD
DIETVEIIRG IPSVKFGDIS SGIVTIHRKK GYTPLRARAK ADGFSKLFYV GKGFELTENR
LKLNFSLDYL DSQPDPRNSF ENYKRYTASA RAEKHFNTEN PLTWNFSIDY TGTIDKEKRD
PDVGFDRYDA YQSIYNNIRI ANGLSWELHK TFFKTLVLKT SYSQSFDRIE QDKWVQITNA
RPVFTNTEAG EFYGAFSDPN YVSHLLVDGK PLHLYTDFAA GGYKRFAGFL NEFLIGLTYN
YNKNNGLGQV YDLAHPPSPE ITTRPRAFKS IPAMQDMSFY VEEQLEKTFW HTDFFLRAGL
RANTLLGLDS RYALHNKVCF DPRVNMKVTF PKIEFANQKA LIISLTGGWG KHSKLPTQEM
LYPQEKYEDF VQLNYYHSQR AYRQLHYKTY IFPQVNYSIM PAVNSKAEVR LGLEYDHHSL
FITYFDERMQ SGFRKMSDYH KVFYKKYDAT GLNHNAITAP PLVENLPYTV QDALILSDME
SNGSAIDKQG MEFQYSSKRL QLLNTRFTLS GAWFHSLYYN SLPVYRPADK DIINNRKYYN
LGVYPEMEKY DCEQLQTSLV ADTYLPELHL ITSVRCDLTW YVINSSPSLS RVPTHYISED
GVRHPYTATE ASDPVLQWLI RPTTISLSDR TPLSMNIHLK ISKEFYKYFT LSIYVNNLFN
FYEDYRVNRQ YINRRGLINP YFGMEMNISL GKSKLAN
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