Gene Coch_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1740 
Symbol 
ID8368186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2075556 
End bp2076512 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content42% 
IMG OID644984180 
Producthypothetical protein 
Protein accessionYP_003141846 
Protein GI256820567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAA CTTTTTACAT TAAAAATACA CAAGCACCTA AGGAAATGAC TCCTCAACAA 
TTGCTCGACC TCCAGCGTGA GGGATTTGTA CAATACTCTA TTGATGATAA CGACGAGCAT
TACTCCCAAG TGATGAACGC ACCGCTCAGT GATTGGGGCT ATATGCTAAT GGGACAAGAA
GGCATCAGCG GTCGCGGTTT TGAGGTCTCT TACGACACCG AAACCCAAGA TTACGGTGTG
CGCGTCTTTA CTCCCAGTAC CGAAGCCGAT TGGTTAGGTG CGTATGAGTT TATTGGCAAA
GTAGCCACTG CATTGGGTAG CAAAGTAGTT GATGAAGAAG GAGAGGTTTA TGAGCCCAAT
GCCATTACGT ACGATTATAG AAACGATATT AAATTTGGCA TCAAATGTTA TGAAGGTGAA
AAAGGAGGAT CTTATCTGTT CGGTGTCTAC CGCCCTATAT GTTTGTCAGA CGAAATGATA
AACGGGTTAT TAGCCGCCGA AGATAAGGTA AAAGCCTTTA GTCAGCTCAT AGAAAAACAA
CTATATGAGC ACCCTGATGC ATATATCGCA CGTCAGCAGT TTTTTAGAAA TGACAGAGGA
GAGGTGATGG GAGCTTATGC TCTTACAGAG GGTGTCCCTA CTATCTTGCC ATATGAATAT
CCGCCTTTTG TAGATTTCAC CCAAGTAAAC CTCAGTCAAG ACGATGTAAA GTTGTGGCGC
ATTAGTTTGG TAGTTATCAA CGGCGATGAA AACGACCCTA ATGCTTATGG GGTACTCGAT
GGGCTCAATT ACCAAACCTT TTTAGAGCGA TTGCCTCAAG AGAAAATACA AAAACTCGAT
GGACATTATA TGTTAGTAGA ACTCAACCAC AAAGAACTTG AAGCTCTTTT ACAAAACGAT
AGGCAAGAAC GCAAAGGATT CTTAGCAAAA TTGAAAAACT TTTTAACGAC GAAATAA
 
Protein sequence
MSRTFYIKNT QAPKEMTPQQ LLDLQREGFV QYSIDDNDEH YSQVMNAPLS DWGYMLMGQE 
GISGRGFEVS YDTETQDYGV RVFTPSTEAD WLGAYEFIGK VATALGSKVV DEEGEVYEPN
AITYDYRNDI KFGIKCYEGE KGGSYLFGVY RPICLSDEMI NGLLAAEDKV KAFSQLIEKQ
LYEHPDAYIA RQQFFRNDRG EVMGAYALTE GVPTILPYEY PPFVDFTQVN LSQDDVKLWR
ISLVVINGDE NDPNAYGVLD GLNYQTFLER LPQEKIQKLD GHYMLVELNH KELEALLQND
RQERKGFLAK LKNFLTTK