| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1731 |
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| Symbol | |
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| ID | 8368177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2064519 |
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| End bp | 2066819 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984171 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_003141837 |
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| Protein GI | 256820558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.80789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA ACGTATTAGG TTATCCTCGT ATCGGTGAAA AACGAGAACT TAAAAAAGCC
AATGAGTCTT TCTGGGCTGG TAAAATATCA GAAGAAGAAC TCTTAGCAGT GGCTGAAAAT
ATTCGTGTTC ACAACTGGAC ACTACAAAAA GAAGCAGGAG TAGATTTGAT TCCTTCTAAC
GACTTCTCTC TTTATGACCA AATGCTTGAC TTTTCGTTTA CAGTAAGTGC TATTCCTGAG
CGTTTTACAC CAATTAAACA TTTGCGTGAT TTAGAACGTT ATTACGCTTT GGCACGTGGC
TATCAAAAAA ATGGTATCGA TATTACTGCA ATGGAAATGA CCAAATGGTT TGATACCAAT
TACCACTATA TCGTACCCGA GTTTACTAAA GACCAATCTT TCAAAATTCT TGTAAACAAA
CCTTTGCAAG AGTTCAACTT GGCTAAAAAA CACGGTTTCG ACACTAAACC TGTACTTATC
GGCTTGGTAA CTTATTTGCT TCTCGGTAAA GAAAAAGAAC AAGGATTCCA CCGCTTAGAC
TTGGCTGAGC GTCTATTGCC TGTGTATGTA CAAATCGTAC GAAGTTTAGT AGATGCAGGT
GCTAAAACTA TTCAAATAGA TGAGCCTTAC TTAGCTCTCG ATCTTCCTGA AGGCGCTGCC
GATGTATACA AAAAAGTATA TACCGAACTA AGAAGCAAAT TCCCTACTAC CGAATTTATC
CTCACTACCT ACTTCGGAGC TTTGGATAAC AATACCGAAT TAGCTGTTTC ATTGCCTTTC
AACGTATTGC ACATCGATTT AGTGCGCGCA GCGGCTCAGC TTGACAAAGT GCTCAAAGCA
CTTCCTGCCG ATAAAAAACT ATCACTTGGA GTAGTAGATG GACGCAATAT TTGGAAAAAT
AACTTCGAGC ATTCATTAGC ATTGATTGAG AAAGCCAAAG AAGCTATCGG TGCTGACCGC
CTATTGATAG CTACTTCTTG CTCTTTATTG CACTCTCCTT GCAACCTCGA ACTCGAAAAC
AACGAGAAAG TGCTTACTCC TGAAATCAAA CAATGGTTGG CTTTTGCTAA ACAAAAAGTA
AAAGAAGTAA CTACTTTGCA AGCTCTTGCT ACAGGTCACA TAACTCCTGA GGTAAAAGTA
GCCTTTGAAG AAAACAAAAA AGCAGCTGAA ACACGTAAAA CTTCACCGCT TATCCACGAC
AACAAAGTGA AAGAGCGTGT GAATAACATC ACAGCCAAAG ACGATGTGCG CCACAGTCCG
TTCAACGAGC GTAAAGTAGC ACAACACAAA GCGTTAAACT TACCTCTTTT TCCTACAACT
ACTATTGGGT CATTCCCTCA AACCGACGAG GTACGCAGCT GGCGTGCTCG CTTCAAAAAA
GGAGAACTCA CTCAAGCCGA ATACGACAAG CTATTGGAAA AAGAAATTGA AGAGTCTATC
CGTTTCCAAG AAGATACCAA TATCGATGTA CTCGTACACG GCGAATTTGA GCGTAACGAT
ATGGTGGAAT ACTTTGGCGA ATTGCTCAAA GGTTACACCT TCACTAAATT CGGTTGGGTA
CAAAGCTACG GTTCACGTTG CGTAAAACCA CCGATTATCT TTGGTGATAT TTCTCGTCCA
GAACCGATGA CTGTACGTTG GAGTAAATAC GCACAATCGC TTACTAAATT GCCCGTAAAA
GGTATGCTTA CAGGCCCTGT AACTATCTTG CAATGGTCGT TTGTACGCGA TGACCAACCG
CGTTCTGAAA CTTGTTTGCA GATAGCTTTA GCAATCCGCG ATGAAGTAGT AGACCTCGAA
AAAGCTGGCA TCAAAGTCAT TCAGATTGAC GAACCAGCTA TCCGTGAAGG ATTGCCATTG
CGCAAGAGCG AGTGGAAAGC CTACTTCGAT TGGGCTATCA AAGCGTTCCG TATTTCAGCT
TCAGGCGTAA AAGACGAAAC TCAAATCCAC ACCCATATGT GCTATTCTGA GTTCAACGAT
ATGATTGAAG CTATCGCCGA TATGGACGCC GATGTGATTA CCATAGAGTG TTCACGCTCA
CAAATGGAAC TCCTCGATGT ATTTGGTGAC TTTAAATATC CTAACGAAAT AGGCCCTGGG
GTATACGATA TTCACTCACC ACGCGTACCT TCACAAGAAG AAATGACCAA CTTGATGAAG
AAAGCCATTT CGGTAGTGCC AAAAGAACAA TTGTGGGTAA ACCCCGACTG CGGACTCAAA
ACGCGTCACT GGCCAGAAAC CAAGGCAGCT CTCCACGCAA TGGTTGATAC CGCCAAAGAA
CTTCGCAATC TCTACAAATA A
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| Protein sequence | MKSNVLGYPR IGEKRELKKA NESFWAGKIS EEELLAVAEN IRVHNWTLQK EAGVDLIPSN
DFSLYDQMLD FSFTVSAIPE RFTPIKHLRD LERYYALARG YQKNGIDITA MEMTKWFDTN
YHYIVPEFTK DQSFKILVNK PLQEFNLAKK HGFDTKPVLI GLVTYLLLGK EKEQGFHRLD
LAERLLPVYV QIVRSLVDAG AKTIQIDEPY LALDLPEGAA DVYKKVYTEL RSKFPTTEFI
LTTYFGALDN NTELAVSLPF NVLHIDLVRA AAQLDKVLKA LPADKKLSLG VVDGRNIWKN
NFEHSLALIE KAKEAIGADR LLIATSCSLL HSPCNLELEN NEKVLTPEIK QWLAFAKQKV
KEVTTLQALA TGHITPEVKV AFEENKKAAE TRKTSPLIHD NKVKERVNNI TAKDDVRHSP
FNERKVAQHK ALNLPLFPTT TIGSFPQTDE VRSWRARFKK GELTQAEYDK LLEKEIEESI
RFQEDTNIDV LVHGEFERND MVEYFGELLK GYTFTKFGWV QSYGSRCVKP PIIFGDISRP
EPMTVRWSKY AQSLTKLPVK GMLTGPVTIL QWSFVRDDQP RSETCLQIAL AIRDEVVDLE
KAGIKVIQID EPAIREGLPL RKSEWKAYFD WAIKAFRISA SGVKDETQIH THMCYSEFND
MIEAIADMDA DVITIECSRS QMELLDVFGD FKYPNEIGPG VYDIHSPRVP SQEEMTNLMK
KAISVVPKEQ LWVNPDCGLK TRHWPETKAA LHAMVDTAKE LRNLYK
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