Gene Coch_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1690 
Symbol 
ID8368136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2019622 
End bp2020230 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID644984130 
Productdethiobiotin synthase 
Protein accessionYP_003141796 
Protein GI256820517 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.439314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA CTTATTTTGT GGTGGGCATT TCCACCGAAG TCGGTAAGAC CGTCGTTTCG 
GCTATCCTTA CCGAAGCTCT TCAAGCCGAT TATTGGAAAC CAATCCAATC TGGCGATTTA 
GAAAACTCCG ATACTCATAA GGTAAAACGC CTCATTAGCA ACTCCCGCAC GGTATTTCAC 
CCTAATAGTT ATGGGCTACA CACACCTGCT AGTCCACATC TTTCTGCTCA GTTAGATGGC 
GTTCGTATTG AGCTTTCCAA AATTGTGCGT CCTACTACCG ATAACACTTT AATTATTGAA 
GCAGCAGGAG GTCTCTATGT TCCTTTAAAT GATGAAGATA CTATGCTCGA TCTTATCCTC 
CCCACCGATA AGGTAGTGCT CGTCTCTCGT CACTATTTGG GTAGTATTAA TCATACAATG 
CTCACTTATG AAGCCCTTAA AAACAAAGGA CTCAACGTTC ACGGCATTAT TTTCAGTGGT 
ACCCCCACAC CGTCTACCGA GGAGTTTATT CTTCATAAAA CAGGACTTCC CGTGCTCTTA 
CGTATAGATG AAGAACCTTA TTTCGATAGG CAAGTTGTTA AAGAATATGC CAGCAAATTA 
AAAATATAA
 
Protein sequence
MKDTYFVVGI STEVGKTVVS AILTEALQAD YWKPIQSGDL ENSDTHKVKR LISNSRTVFH 
PNSYGLHTPA SPHLSAQLDG VRIELSKIVR PTTDNTLIIE AAGGLYVPLN DEDTMLDLIL 
PTDKVVLVSR HYLGSINHTM LTYEALKNKG LNVHGIIFSG TPTPSTEEFI LHKTGLPVLL 
RIDEEPYFDR QVVKEYASKL KI