| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1656 |
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| Symbol | |
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| ID | 8368102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1981689 |
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| End bp | 1983572 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984096 |
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| Product | hypothetical protein |
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| Protein accession | YP_003141762 |
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| Protein GI | 256820483 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.558221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA CCTTTACTCT TATAGCACTC TTTCTCTTGG GAATGAATTA TCTTCTTTCT
CAAGAAATAG ATACTTTAAG GGTAAAAGAC TCTGTACTGG GAGGCATTTC ACCTGAAAGA
GAAGCTAAAA ACAGAGTATT CTATGAGAGA ATCAAAAACT TCTTTAGCAA ATATAAGCTC
ACTAAAAATC TCAACAATCT TATTGTAATT GAGGAAAAAG CAACCGGTAG AACACTCACC
CCCACAGCTA TTGTTACTAC TACGGTTACC CATATAAAAG CCCCTTCTTA TCAAGGGAAA
ATCATTAGAA ATATCGTTAT TACTACCTTA GACCCTTTTG GGTTTGACGA GAAAGATTTA
AACAAAGTAC CTAACACTCG TTTGGAGCGT CTTGGTAATG CACTTCACGT GAAAACCCGC
GAAAGTACGG TACGCAAGTT TCTTCTGTTT AAAAAGGATA AGCCCTTAGA TACCCTTTTG
CTGAGTGAAA CCGAACGTGT ATTGCGCAAT CAGCGGTATA TCCGTAGGGC ACAAGTGTGT
GCTATCCCTG TGAGTCAAAC CTCCGATTCA GTAGATGTGC AAGTGAATGT GCTCGATAGC
TGGTCTATAT ACGTCGACGG CGACTTGGCA GGAAGTAGAG GCTGGACACG ACTTACCGAG
CAAAATCTCT TTGGAATAGG ACACGAACTC TCGCTCACCT ATCAACAATA CTTTTCAGGA
ATCGGGAACA ATGGTAAAGG TTTTAATTAT GTGGTGAGAA ACATCAAAAA CACTTACATC
AATGTGCGAA CCGGTTATTA TTCTGATTAC GAGAACTATT TTTCAAAGAG CATACAGGTA
GAGCGACCGC TGTATTCACC TTTGGCACGT TGGTCGGGGC GCTTAGGTTA TTACGAATAC
CGATATGAAG ACGAAGGTAT TAGTTATCGC GACTCTATCT ATATTCCTAT CCTAATGACA
CGCACCTTCG ATGCTTTTGG TAGTTGGGTA AAGCCCCTCA GAAAAGTAGA AAATAAGCGC
ATCAATAACT TTATCATAGC TGGGCGTTTT CGCAATATAA ATTATTACGA GAAACCTTCT
CCCGAGATAG ACCCCGAGCA ATATTACGGC AACGAGAACC TATATCTCAC CCAATTCAGT
CTCAATAGTA CAGGCTTTAT AAAAGACCGC TATATCTTTC GCAACGGCGA TATCGAAGAC
GTAGGCATAG GACGCTCTTT GTTTCTCACC TCAGGGATAC TGCGGAAGAA CTACGCTACC
TTGTCCTATC TCGGTATAGG CTTTGCTGAG GCAAACTATA CCAAGCGTGG TTATCATTCT
ATCAACTTTG AGGTAGGCAC ATTCTTTAAG GACGGCACGA ACAAAGAAAC TGTGCTAAAA
GGTGAAGGCA CCTATTTCAG TAAATTGTTC GACATAGGCG ATTGGCATTT TCGTCAGTTC
TTGCGCTCCT CATTTGTAGT AGGTTTTAAC CGAAATGTAT ACCAGCGAGA CAGAATCAAC
TTAAACGAAT CTAATGGTAT TTTAGGCTTC AGTAGTCGTG AAGTATACGG CACACGCAAG
CTTATACTCA CCTCACAAAC GCAAGTATAT GCCCCTTTTC AGCTGATAGG CTTTAGGTTT
AGTCCGTTTC TCTCAGCCGA TATAGGTTTT ATAGGTAGGG AAAACACTGC CTTTCTAAAA
ACAGAAGTAT ACTCTAAGGT TTCCATAGGT TTTTATATAT CCAACGACTA TTTTCCCTTT
GGAGCCATAC AATTCTCCTT TGGGTATTAT CCTAATATCC CAGGTACAGG TAACAATATC
TTCAAATTTA CAGGCGTTAC CAACGACGAT TTCAGGCTAC ACAGCTTTTC TCAACGCTTG
CCTAATATTG TATCGTTTAG GTAA
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| Protein sequence | MRKTFTLIAL FLLGMNYLLS QEIDTLRVKD SVLGGISPER EAKNRVFYER IKNFFSKYKL
TKNLNNLIVI EEKATGRTLT PTAIVTTTVT HIKAPSYQGK IIRNIVITTL DPFGFDEKDL
NKVPNTRLER LGNALHVKTR ESTVRKFLLF KKDKPLDTLL LSETERVLRN QRYIRRAQVC
AIPVSQTSDS VDVQVNVLDS WSIYVDGDLA GSRGWTRLTE QNLFGIGHEL SLTYQQYFSG
IGNNGKGFNY VVRNIKNTYI NVRTGYYSDY ENYFSKSIQV ERPLYSPLAR WSGRLGYYEY
RYEDEGISYR DSIYIPILMT RTFDAFGSWV KPLRKVENKR INNFIIAGRF RNINYYEKPS
PEIDPEQYYG NENLYLTQFS LNSTGFIKDR YIFRNGDIED VGIGRSLFLT SGILRKNYAT
LSYLGIGFAE ANYTKRGYHS INFEVGTFFK DGTNKETVLK GEGTYFSKLF DIGDWHFRQF
LRSSFVVGFN RNVYQRDRIN LNESNGILGF SSREVYGTRK LILTSQTQVY APFQLIGFRF
SPFLSADIGF IGRENTAFLK TEVYSKVSIG FYISNDYFPF GAIQFSFGYY PNIPGTGNNI
FKFTGVTNDD FRLHSFSQRL PNIVSFR
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